Remote Sensing of Environment
Volume 147, 5 May 2014, Pages 1-12
Prospects for chlorophyll fluorescence remote sensing from the Orbiting Carbon Observatory-2
Highlights
- •We show the capability of the OCO-2 mission to retrieve chlorophyll fluorescence.
- •We find that OCO-2 will dramatically improve sampling and resolution.
- •We verified precision and accuracy estimates using thermal vacuum test data.
- •We evaluate the performance for an OCO-2 repeat cycle using simulated data.
Abstract
The Orbiting Carbon Observatory-2 (OCO-2), scheduled to launch in July 2014, is a NASA mission designed to measure atmospheric CO2. Its main purpose is to allow inversions of net flux estimates of CO2 on regional to continental scales using the total column CO2 retrieved using high-resolution spectra in the 0.76, 1.6, and 2.0 μm ranges. Recently, it was shown that solar-induced chlorophyll fluorescence (SIF), a proxy for gross primary production (GPP, carbon uptake through photosynthesis), can be accurately retrieved from space using high spectral resolution radiances in the 750 nm range from the Japanese GOSAT and European GOME-2 instruments. Here, we use real OCO-2 thermal vacuum test data as well as a full repeat cycle (16 days) of simulated OCO-2 spectra under realistic conditions to evaluate the potential of OCO-2 for retrievals of chlorophyll fluorescence and also its dependence on clouds and aerosols. We find that the single-measurement precision is 0.3–0.5 Wm− 2sr− 1 μm− 1 (15–25% of typical peak values), better than current measurements from space but still difficult to interpret on a single-sounding basis. The most significant advancement will come from smaller ground-pixel sizes and increased measurement frequency, with a 100-fold increase compared to GOSAT (and about 8 times higher than GOME-2). This will largely decrease the need for coarse spatial and temporal averaging in data analysis and pave the way to accurate local studies. We also find that the lack of full global mapping from the OCO-2 only incurs small representativeness errors on regional averages. Eventually, the combination of net ecosystem exchange (NEE) derived from CO2 source/sink inversions and SIF as proxy for GPP from the same satellite will provide a more process-based understanding of the global carbon cycle.
Introduction
Photosynthetic uptake of carbon dioxide by terrestrial vegetation is driven by absorbed photosynthetically active radiation (APAR) in the 400–700 nm wavelength region. The efficiency with which photons are used for actual photosynthesis varies because absorbed energy can also be dissipated into heat (non-photochemical quenching, NPQ). A small fraction is also re-radiated at longer wavelengths (660–800 nm), which is termed fluorescence and has been widely used in photosynthesis research for decades (e.g. Baker, 2008, Campbell et al., 2008, Corp et al., 2006, Genty et al., 1989, Krause and Weis, 1984, Moya et al., 2004). Active pulse-modulated fluorometry allows a direct quantification of photosynthetic efficiency by measuring fluorescence at steady state as well as upon illumination with a saturating light pulse. Even though this technique cannot be directly applied from space, steady-state sun-induced chlorophyll fluorescence (SIF) also offers the potential to place constraints on gross primary production (GPP) and thereby gain a more mechanistic understanding of ecosystem carbon exchange (Frankenberg, Fisher et al., 2011).
Recently, Joiner et al. (2011), Frankenberg, Butz, and Toon (2011), Frankenberg, Fisher, et al. (2011), and Guanter et al. (2012) showed that SIF can be retrieved based on in-filling of solar absorption features, so called Fraunhofer lines. The first real retrievals were performed using high-resolution spectra of the oxygen A-band region from the Tanso Fourier Transform Spectrometer onboard of the Japanese GOSAT satellite (Hamazaki et al., 2005, Kuze et al., 2009). Later, Joiner et al. (2012) showed that even moderate spectral resolution can be used to infer SIF using either a very broad Fraunhofer line at 866 nm (using SCIAMACHY) or applying a larger spectral range from 715 to 780 nm using GOME-2 (Joiner et al., 2013). In general, there is a trade-off between spectral resolution and spatio-temporal sampling. On the one hand, high spectral resolution enables more robust and accurate SIF retrievals but on the other hand it sacrifices spatial sampling. GOSAT retrievals (Frankenberg, Butz and Toon, 2011, Frankenberg, Fisher, et al., 2011, Guanter et al., 2012, Joiner et al., 2012, Joiner et al., 2011), for instance, are well characterized but cannot provide the spatial mapping of GOME-2. Neither will OCO-2 provide full spatial mapping even though it records about 8 times more spectra than GOME-2. Despite these limitations, GOSAT SIF retrievals have already been proven very useful in the analysis of carbon exchange in the tropical Amazon (Lee et al., 2013, Parazoo et al., 2013).
The Orbiting Carbon Observatory-2 (OCO-2), to be launched in July 2014, can alleviate some of the drawbacks of current SIF observations and combine the advantages of both GOSAT and GOME-2. It will enable SIF retrievals similar to GOSAT but will acquire 24 spectra per second instead of one every 4 s. This almost 100-fold increase in data density compared to GOSAT is combined with much smaller ground-pixels (1.3 ×ばつ 2.25 km2 instead of a circular footprint with 10 km diameter for GOSAT or 80 ×ばつ 40 km2 for GOME-2). As such, it has the potential to largely improve current SIF retrievals as well as bringing together scientific communities focused on top-down net ecosystem exchange inversions based on atmospheric CO2 measurements with those using bottom-up estimates derived from remotely sensed vegetation parameters. Here, we will quantify the potential of OCO-2 using both retrievals based on a synthetic full repeat cycle of OCO-2 data as well as real thermal vacuum test data. The main purpose of this publication is to make potential users aware of datasets for vegetation-specific applications that can be expected from the OCO-2. The primary mission objective of OCO-2 is to measure atmospheric CO2 with the precision and accuracy needed for source/sink inversions on regional scales. Thus, the current user community is composed of atmospheric inversion experts and global carbon cycle modelers. The new fluorescence product might be of interest to different scientific communities and this paper tries to bridge this gap as most previous publications on the OCO-2 focused on CO2 only and scientists might be unaware of the potential of OCO-2 fluorescence retrievals and their applications in photosynthesis research and carbon cycle science. The use of atmospheric CO2 in conjunction with fluorescence has just started (Parazoo et al., 2013) and we anticipate more synergistic applications in the future.
Section snippets
The OCO-2 satellite
The OCO-2 instrument is a 3-channel grating spectrometer scheduled to launch into a sun-synchronous orbit (as part of the A-train) in mid 2014. At 3 Hz readout rate, it will record high resolution spectra of the O2 A-band (0.757–0.775 μm, FWHM = 0.042 nm), a weak CO2 band (1.594–1.627 μm, FWHM = 0.076 nm), and a strong CO2 band (2.043–2.087 μm, FWHM = 0.097 nm) with 8 independent along-slit focal plane array readouts, from here on denoted as footprints. The nominal spatial resolution per footprint is 1.3 ×ばつ
Expected OCO-2 fluorescence retrieval performance
Retrieval characteristics were evaluated using approximately 80,000 real atmospheric spectra measured during the OCO-2 Thermal VACuum (TVAC) tests at JPL on April 20, 2012. Data were acquired in direct-sun mode, thus no actual chlorophyll fluorescence is apparent in the spectra. However, the inversion procedure for chlorophyll fluorescence can still be performed in order to evaluate expected and observed error characteristics for single soundings as well as accuracy (i.e. checking whether we
Expected OCO-2 fluorescence datasets on the global scale
So far, we have only analyzed the expected OCO-2 performance on a single-sounding or ensemble averages. In this section, we will cover aspects relevant to carbon cycle modelers on the global scale, i.e.
- •What impact does the footprint size have on SIF retrievals?
- •What errors on the regional scale are introduced by preferential and incomplete sampling of OCO-2 only along a narrow orbit track?
- •What datasets can I expect within a typical OCO-2 repeat cycle, how many days of averaging do I need at what
Vegetation indices from OCO-2
One of the standard retrieval products from the OCO-2 are surface albedos and slopes within the 3 bands at 0.76, 1.6, and 2.0 μm. Owing to the high spectral resolution, these albedos are unperturbed by gaseous absorption and also implicitly corrected for atmospheric scattering by the full-physics 3-band OCO-2 retrieval algorithm (Bösch et al., 2006, O'Dell et al., 2012). In addition, cloud and aerosol filtering based on the strongly absorbing oxygen band as well as the CO2 ratio approach is very
Conclusions
We have used the Thermal VACuum (TVAC) data from the actual OCO-2 instrument as well as orbit simulations for a full Nadir repeat cycle of 16 days to study the prospects of OCO-2 for remote sensing of chlorophyll fluorescence. We found that the instrument performs very well and will provide solar-induced chlorophyll fluorescence at 755 nm (SIF755) with a single-measurement precision of about 0.3–0.5 Wm− 2sr− 1 μm− 1 and accuracy of better than 0.05 Wm− 2sr− 1 μm− 1. While these numbers are already better
Acknowledgments
Part of the research described in this paper was carried out by the Jet Propulsion Laboratory, California Institute of Technology, under a contract with the National Aeronautics and Space Administration. ©2013. All rights reserved. The Colorado State University contributions to the ACOS task were supported by NASA contract 1439002. We thank 4 anonymous reviewers for thorough and constructive reviews that strengthened the manuscript substantially.
References (43)
- P. Campbell et al.
Contribution of chlorophyll fluorescence to the apparent vegetation reflectance
Science of the Total Environment
(2008) - R. Fensholt et al.
Derivation of a shortwave infrared water stress index from MODIS near- and shortwave infrared data in a semiarid environment
Remote Sensing of Environment
(2003) - B.C. Gao
"NDWI"—A normalized difference water index for remote sensing of vegetation liquid water from space
Remote Sensing of Environment
(1996) - B. Genty et al.
The relationship between the quantum yield of photosynthetic electron transport and quenching of chlorophyll fluorescence
Biochimica et Biophysica Acta
(1989) - L. Guanter et al.
Retrieval and global assessment of terrestrial chlorophyll fluorescence from GOSAT space measurements
Remote Sensing of Environment
(2012) - L. Guanter et al.
Using field spectroscopy to assess the potential of statistical approaches for the retrieval of sun-induced chlorophyll fluorescence from ground and space
Remote Sensing of Environment
(2013) - T. Hilker et al.
Remote sensing of tropical ecosystems: Atmospheric correction and cloud masking matter
Remote Sensing of Environment
(2012) - E. Raymond Hunt et al.
Detection of changes in leaf water content using near- and middle-infrared reflectances
Remote Sensing of Environment
(1989) - I. Moya et al.
A new instrument for passive remote sensing: 1. Measurements of sunlight-induced chlorophyll fluorescence
Remote Sensing of Environment
(2004) - V. Natraj et al.
A fast linearized pseudo-spherical two orders of scattering model to account for polarization in vertically inhomogeneous scattering absorbing media
Journal of Quantitative Spectroscopy and Radiative Transfer
(2007)
A model for chlorophyll fluorescence and photosynthesis at leaf scale
Agricultural and forest meteorology
(2009)
Chlorophyll fluorescence: A probe of photosynthesis in vivo
Annual Review of Plant Biology
(2008)
Terrestrial gross carbon dioxide uptake: Global distribution and covariation with climate
Science
(2010)
Photophysiological expressions of iron stress in phytoplankton
Annual Review of Marine Science
(2013)
Space-based near-infrared CO2 measurements: Testing the Orbiting Carbon Observatory retrieval algorithm and validation concept using SCIAMACHY observations over Park Falls, Wisconsin
Journal of Geophysical Research
(2006)
Fluorescence sensing techniques for vegetation assessment
Applied Optics
(2006)
Disentangling chlorophyll fluorescence from atmospheric scattering effects in O-2 A-band spectra of reflected sun-light
Geophysical Research Letters
(2011)
New global observations of the terrestrial carbon cycle from GOSAT: Patterns of plant fluorescence with gross primary productivity
Geophysical Research Letters
(2011)
Remote sensing of near-infrared chlorophyll fluorescence from space in scattering atmospheres: implications for its retrieval and interferences with atmospheric CO2 retrievals
Atmospheric Measurement Techniques
(2012)
Iterative maximum a posteriori (IMAP)-DOAS for retrieval of strongly absorbing trace gases: Model studies for CH4 and CO2 retrieval from near infrared spectra of SCIAMACHY onboard ENVISAT
Atmospheric Chemistry and Physics
(2005)
Advantages of diffuse radiation for terrestrial ecosystem productivity
Journal of Geophysical Research
(2002)
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