PhyloTree Y - Y-SNP details

Details of the Y-SNP markers included in the minimal Y tree

Marker name Alias(es) rsSNP ID Y-chromosomal location
based on GRCh37/hg19 Y-chromosomal location
based on GRCh38/hg38 Mutation Major clade
affiliation Notes

L1036 - 3436657 3568616 A>G A0

L1058 - 23973630 21827483 G>A A0

L1075 - 14125645 12004939 C>T A0

L896 - 21706626 19544740 A>T A0

L979 - 3436364 3568323 G>T A0

L980 - 3436387 3568346 C>G A0

L981 - 6894187 7026146 C>T A0

L987 - 7583448 7715407 C>A A0

L991 CTS2809 - 14497059 12385264 C>A A0

L994 rs371502065 14902417 12790484 C>T A0

V148 rs181335666 6788191 6920150 G>A A0

V164 rs181016083 18255814 16143934 C>T A0

V166 rs187287389 16292866 14180986 G>A A0

L1086 - 2826312 2958271 A>T A00

L1159 - 23021666 20859780 A>T A00

L1284 AF6 - 6877771 7009730 A>G A00

L1085 - 2790726 2922685 T>C A0'1'2'3'4

L1130 - 16661010 14549130 T>G A0'1'2'3'4

L1155 - 22191266 20029380 G>C A0'1'2'3'4

M31 rs369315948 21739754 19577868 G>C A1

P82 - 6739826 6871785 C>A A1

V4 rs187409543 6846482 6978441 G>A A1

P305 rs72625368 2710154 2842113 G>A A1'2'3'4

V168 rs191505182 17947672 15835792 G>A A1'2'3'4

V171 rs2524861 4898665 5030624 C>G A1'2'3'4

L602 - 16582907 14471027 A>G A2

L963 - 17661248 15549368 C>A A2

M14 rs3905 21722268 19560382 T>C A2

M6 rs3897 18571026 16459146 A>G A2

P28 rs374971653 21881115 19719229 C>T A2

P3 PN3; M29; L968 - 21610585 19448699 C>T A2

V50 rs189205028 6845936 6977895 T>C A2

L419 PF712 rs111762602 15204887 13092973 G>A A2'3

PK1 M11782 rs373116908 22583507 20421621 C>A A2'3

P108 - 15426248 13314368 C>T A2'3'4

V221 rs188292317 7589303 7721262 G>T A2'3'4

M118 - 21763965 19602079 A>T A3

M13 PF1374 rs3904 21722098 19560212 G>C A3

M144 rs2032619 21925500 19763614 T>C A3

M190 Page35; PF1373 rs2032603 14968527 12856602 A>G A3

M202 rs2032649 15029492 12917580 T>G A3

M28 rs369313031 21729839 19567953 T>G A3

M32 - 21740436 19578550 T>C A3

M51 Page42 rs34078768 21868863 19706977 G>A A3

P289 PF1372 rs372246020 8467082 8599041 C>G A3

V10 Page77; PF1364 rs34555473 6893093 7025052 A>C A3

M42 rs2032630 21866840 19704954 A>T A4=BCDEF

P97 - 14886273 12774339 G>T A4=BCDEF

50f2(P) M8659 rs112236481 23497067 21335181 C>G B

G1 rs79947741 21932926 19771040 A>G B

L1388 - 6753313 6885272 G>C B

L1394 - 19413382 17301502 A>G B

M109 rs370186578 21774180 19612294 G>A B

M112 rs111725135 21767959 19606073 C>T B

M150 rs371646183 21869519 19707633 C>T B

M152 Page60 rs35681523 21868068 19706182 C>T B

M181 Page32 rs2032599 14851554 12739620 T>C B

M182 rs2032601 14869076 12757146 C>T B

M192 rs2032662 15014262 12902350 C>T B

M218 rs2032671 15437063 13325183 C>T B

M236 - 2649696 2781655 G>C B

M60 rs2032623 21878072..21878073 19716186..19716187 ins T B

M6529 rs113717750 2657411 2789370 G>A B

M7104 rs112887592 2711408 2843367 C>G B

M7106 rs113134414 6982169 7114128 A>C B

M7583 rs374589940 2844095 2976054 G>T B

M7585 rs367912965 6753433 6885392 A>G B

M8035 rs368217995 7606120 7738079 T>C B

M8036 rs377707696 7769194 7901153 C>T B

M8341 - 13943825 11823119 C>T B

M8342 - 14587628 12475828 G>A B

M8348 - 6637124 6769083 C>T B

M8351 rs375423133 6790204 6922163 C>G B

M8495 rs368790958 2736732 2868691 T>G B

M8497 rs371100148 8156900 8288859 T>G B

P32 rs200687194 14495244 12383441 del T B

P6 rs112194431 6768265 6900224 G>C B

P85 M247 rs9341290 15020578 12908667 T>C B

P90 rs111691221 14850579 12738645 C>T B

V197 rs181987418 23120337 20958451 G>A B

V227 rs191044406 7599027 7730986 A>T B

V244 M8676 rs112298449 2798459 2930418 C>T B

V62 rs181258697 17201891 15090011 G>A B

V75 rs190560626 17421349 15309469 G>A B

V78 rs187723852 6859558 6991517 C>G B

B477 Z31885 rs372241804 6822655 6954614 G>A C

B65 AM00847 rs374541802 23430253 21268367 C>G C

CTS11043 - 22914979 20753093 G>T C

F1144 - 8307194 8439153 G>A C

F1370 - 8643365 8775324 G>C C

F3393 Z1426 - 23023974 20862088 C>A C

F3918 - 14533880 12422081 A>T C

F845 - 6875257 7007216 T>G C

K281 AM00694 rs370864779 17244161 15132281 G>A C

K29 - 6630453 6762412 G>T C

K362 - 21527071 19365185 G>A C

K550 - 18165571 16053691 C>T C

K60 - 4039023 4170982 C>A C

K88 - 6012134 6144093 A>T C

L1373 - 22711592 20549706 A>G C

M105 rs2032612 21866491 19704605 C>T C

M130 RPS4Y711; Page51 rs35284970 2734854 2866813 C>T C

M208 rs2032659 15576203 13464323 C>T C

M210 rs2032660 15575780 13463900 A>T C

M216 rs2032666 15437564 13325684 C>T C

M217 rs2032668 15437333 13325453 A>C C

M347 - 2877479 3009438 A>G C

M356 - 2888203 3020162 C>G C

M38 rs369611932 21742158 19580272 T>G C

M386 CTS117 - 2738986 2870945 C>T C

M401 - 2745569..2745570 2877528..2877529 ins TG C

M48 rs373681213 21749881 19587995 A>G C

M8 rs3899 7291534 7423493 G>T C

P323 F1668 - 14001179 11880473 G>A C

P33 - 24987987;26621735;27340668 22841840;24475588;25194521 T>C C multicopy

P355 - 22077527 19915641 C>T C

P369 Y4654; FGC16521 - 23785261 21623375 C>G C

P39 - 14484581 12363850 G>A C

P44 - 14495251 12383448 G>A C

P92 - 14850853 12738919 C>T C

PH1321 rs370921272 14546318 12434519 A>C C

PH2398 - 16605041 14493161 G>A C

PH338 - 6953019 7084978 G>A C

PH41 - 2766458 2898417 A>C C

PH4186 - 19057783 16945903 T>C C

PH4682 - 21166296 19004410 G>T C

PH475 - 7166937 7298896 C>T C

PH4949 - 21764747 19602861 A>G C

PH5224 - 22827752 20665866 C>A C

PH702 - 13912370 11791664 C>T C

PH767 - 13988414 11867708 G>A C

SK1010 rs370600351 6933080 7065039 A>G C

V20 rs182352067 6845955 6977914 G>A C

Z1300 - 7801788 7933747 C>T C

Z1338 F2613 - 17844001 15732121 T>C C

Z1453 CTS9677 - 19020366 16908486 A>G C

Z31879 rs376910882 18715450 16603570 G>T C

Z5899 - 2852640 2984599 T>C C

M168 PF1416 rs2032595 14813991 12702062 C>T CDEF

P143 PF2587 rs4141886 14197867 12077161 G>A CF

CTS94 - 2726402 2858361 T>G D

JST006841 Page3 rs2071394 6736154 6868113 C>T D

JST021355 rs2267802 2828425 2960384 A>G D

JST022457 rs2268591 24464597 22318450 G>C D

L1375 - 7659530 7791489 G>T D

M116 rs201362608 21765281 19603395 T>A D

M125 rs2032614 21930287 19768401 T>C D

M15 rs3906 21724699..21724702 19562813..19562816 GGCA>TTGTACAGAGA D

M174 Page30 rs2032602 14954280 12842354 T>C D

M179 Page31 rs2032596 14838700 12726767 C>T D

M55 rs2032621 21872738 19710852 T>C D

N1 rs3212291 14851526 12739592 C>G D

P42 - 14481731 12361000 C>T D

P47 - 14497168 12385373 C>T D

P99 - 14886386 12774452 C>T D

Z1516 CTS583 - 6863631 6995590 T>G D

Z1520 CTS2098 - 14181878 12061172 T>C D

Z1569 CTS504 - 6804892 6936851 T>C D

Z1576 CTS7590 - 17547333 15435453 A>G D

Z1627 CTS9508 - 18942397 16830517 T>G D

M145 P205; PF1444 rs3848982 21717208 19555322 C>T DE

M203 Page36; PF1435 rs2032653 15591537 13479657 G>C DE

L336 PF1825 rs112779735 21903853 19741967 G>A E

L485 rs9786118 8852858 8984817 C>T E

L514 rs9786371 14636457 12524526 C>T E

L618 - 15339697 13227815 T>C E

M123 PF2023 rs371143248 21764586 19602700 C>T E

M132 rs2032617 21896261 19734375 G>T E

M180 P88 rs2032598 14850341 12738407 T>C E

M183 Page33 rs2032600 14888783 12776849 A>C E

M191 P86 rs2032590 15019613 12907702 T>G E

M2 sY81 rs9785941 14096577 11975871 A>G E

M215 Page40; PF1942 rs2032654 15467824 13355944 A>G E

M281 rs13447370 21764500 19602614 C>T E

M293 rs9341316 22744939 20583053 T>G E

M310 PF2402 rs13447357 22751863 20589977 C>T E

M33 rs368762706 21740450 19578564 A>C E

M34 PF2022 rs373666971 21740716 19578830 G>T E

M35 rs375228668 21741703 19579817 G>C E

M40 SRY4064; SRY8299; PF1445 rs9786608 2663943 2795902 C>T E

M44 rs374966967 21752644 19590758 G>C E

M521 rs377458712 6822948 6954907 C>T E

M75 rs2032639 21890177 19728291 G>A E

M78 PF2186 rs368977028 21893303 19731417 C>T E

M81 PF2554 rs2032640 21892572 19730686 C>T E

M84 rs2032642 21898363 19736477 del T E

M96 PF1823 rs9306841 21778998 19617112 C>G E

P1 PN1 rs73626946 21612167 19450281 G>A E

P147 PF1938 rs16980577 21083420 18921534 T>A E

P177 PF1939 rs16980473 14159846 12039140 C>T E

P179 rs16980621 14060308 11939602 A>C E

P189 rs9786819 14197977 12077271 G>A E

P2 PN2; PF1940 rs9785756 21610831 19448945 G>A E

P29 PF1643 rs60115999 14497207 12385412 A>C E

U174 P252 rs16980586 16251357 14139477 G>A E

U175 rs16980588 16253694 14141814 G>A E

U181 rs16980589 16374426 14262546 C>T E

U209 rs16980502 17294958 15183078 C>T E

U290 rs16980406 21646058 19484172 T>A E

V12 Z1216 - 6823099 6955058 A>G E

V13 PF2211 rs368031074 6842263 6974222 G>A E

V16 - 6851471 6983430 C>T E

V22 rs368511174 6859957 6991916 T>C E

V32 rs371254614 6932821 7064780 G>C E

V36 PF2210 rs371443469 6814246 6946205 T>C E

V38 TSC0077541 rs768983 6818291 6950250 C>T E

V6 rs369197260 6932007 7063966 G>C E

V65 PF2272 - 17287868 15175988 C>A E

V68 rs373648041 17664771 15552891 A>C E

V95 - 5274968 5406927 C>G E

Z1902 - 22823155 20661269 A>G E

Z1919 CTS4231; PF2137 - 15499572 13387692 G>A E

Z1920 CTS4235; PF2228 - 15502485 13390605 T>A E

Z5994 - 6766753 6898712 A>T E

Z827 CTS1243 rs367988033 7290454 7422413 G>C E

Z830 PF1961 rs369637510 7729622 7861581 G>A E

M213 P137; Page38; PF2673 rs2032665 15526751 13414871 T>C F

M89 PF2746 rs2032652 21917313 19755427 C>T F

P14 PF2704 rs9786420 17398598 15286718 C>T F

CTS2488 - 14326884 12206178 C>G G

CTS342 - 6700171 6832130 G>T G

CTS4803 - 15833180 13721300 G>A G

CTS5762 Z1819 - 16471001 14359121 C>G G

L1259 M3308; CTS4367; PF2970 - 15615340 13503460 C>G G

L140 S316 - 7570859 7702818 del T G

L156 PF3002 rs35190095 17174741 15062861 A>T G

L183 - 8467136 8599095 G>C G

L223 rs56221698 6345148 6477107 C>G G

L293 - 9985022 10147413 G>C G

L30 S126; PF3267 rs34134567 15604899 13493019 C>T G

L31 S149; PF3142 rs35617575 14028148 11907442 C>A G

L497 S317 rs35141399 17423320 15311440 C>T G

L645 - 2888673 3020632 A>C G

L72 S315 - 23243887 21082001 G>C G

L833 - 15541217 13429337 T>C G

L90 Page19; S133 rs35169834 21628300 19466414 G>A G

L91 S285; PF3246 - 21645555 19483669 G>C G

M201 PF2957 rs2032636 15027529 12915617 G>T G

M285 rs13447378 22741740 20579854 G>C G

M342 rs368036847 23243942 21082056 C>T G

M377 rs368682405 15027433 12915521 A>G G

M406 PF3285 - 2749995 2881954 T>G G

M485 L190 - 18759690 16647810 C>T G

M527 L78 rs35285796 14871976 12760046 C>T G

P15 PF3112 rs370167410 23244026 21082140 C>T G

P257 U6; PF2950 rs2740980 14432928 12312201 G>A G

P287 PF3140 rs4116820 22072097 19910211 G>T G

P303 Page108; S135; Z765; PF3340 rs72625365 21645348 19483462 T>C G

PF2824 - 5253861 5385820 G>A G

PF3146 - 5688132 5820091 C>T G

PF3359 - 7877472 8009431 G>A G

U1 rs9785956 15058878 12946970 A>G G

U13 L13; S131 rs9786706 14698928 12586994 C>T G

U16 L14; Page57; S130 rs35474563 22917995 20756109 C>T G

U5 PF3141 rs2178500 23973594 21827447 T>G G

U8 L32; S148; PF3266 rs7892988 14692227 12580293 T>C G

Z1903 CTS5990 - 16596946 14485066 A>G G

Z2047 - 14281832 12161126 G>A G

Z6717 FGC757; SK1111 - 21905480 19743594 G>A G

Z6718 FGC759; SK1110 - 21979648 19817762 G>A G

Z724 - 6835545 6967504 C>T G

Z725 - 7897070 8029029 del C G

Z738 CTS1899; PF6851 - 14116041 11995335 A>C G

Z764 PF3337 - 18023391 15911511 G>T G

F1329 M3658; PF2622; YSC0001299 - 8589031 8720990 C>T GHIJKLT

Apt rs376563811 23496331 21334445 C>T H

F4133 M2020 - 9131367 9293758 C>A H

L901 M2939 - 17844304 15732424 C>T H

L902 M3061 - 23009978 20848092 C>T H

M282 rs13447371 21764431 19602545 T>C H

M2853 - 15748250 13636370 C>T H

M2940 Z4384 - 17846704 15734824 C>A H

M2970 Z4393 - 18870223 16758343 T>G H

M2972 Z5875 - 18881280 16769400 C>T H

M3035 Z4329 rs74378870 21940316 19778430 C>T H

M370 - 2888598 3020557 C>G H

M52 rs376769460 21753199 19591313 A>C H

M69 Page45 rs2032673 21894058 19732172 T>C H

M82 rs2032675 21894174..21894175 19732288..19732289 del AT H

P96 - 14869743 12757813 C>A H

PR2906 - 18865398 16753518 A>G H

PR5932 - 16699062 14587182 G>A H

Z14258 - 2697625 2829584 G>A H

Z14262 GM1 - 4227676 4359635 C>A H

Z194 - 7743644 7875603 A>G H

Z4452 - 17508064 15396184 C>A H

Z4507 - 6680599 6812558 T>A H

Z5857 - 2759285 2891244 C>G H

Z5865 - 2667783 2799742 C>T H

Z5867 - 2866232 2998191 C>T H

Z9469 - 18622326 16510446 G>A H

M578 F929; PF3494; S6397 rs73614810 7202703 7334662 C>T HIJKLT

CTS10057 - 19232160 17120280 C>T I

CTS10100 - 19255890 17144010 G>A I

CTS1977 - 14140273 12019567 G>A I

CTS4544 - 15707131 13595251 C>T I

CTS595 - 6874115 7006074 C>T I

CTS616 - 6906332 7038291 C>G I

CTS6364 Z2336 - 16850779 14738899 A>T I

CTS6433 - 16889964 14778084 T>C I

CTS9183 - 18732197 16620317 A>G I

DF29 S438 - 3626279 3758238 A>G I

L1229 - 14937828 12825903 C>A I

L1237 - 21742084 19580198 A>G I

L1286 - 21778662 19616776 G>A I

L1287 - 21970862 19808976 G>T I

L161 S185 - 22513718 20351832 C>T I

L22 S142 rs34626372 8576009 8707968 A>C I

L38 S154 rs7892889 15668070 13556190 A>G I

L460 S238; PF3647 rs7892855 7879415 8011374 A>C I

L596 S292; PF6907 - 14197631 12076925 G>A I

L597 S333 - 18887888 16776008 T>A I

L621 S392 - 18760081 16648201 G>A I

L68 S329; PF3781 rs35547782 18700150 16588270 C>T I

L701 - 6753316 6885275 C>T I

L80 rs35960273 14640715 12528784 A>G I

L801 S390 - 21763755 19601869 A>C I

L813 Z719; S436 - 7659777 7791736 A>G I

M170 PF3715 rs2032597 14847792 12735858 A>C I

M223 rs367573274 21717307 19555421 G>A I

M227 rs9341274 15591446 13479566 C>G I

M253 rs9341296 15022707 12910796 C>T I

M258 PF3721 rs9341301 15023364 12911452 T>C I

M26 PF4056 rs2032629 21865821 19703935 G>A I

M284 - 22750461..22750464 20588575..20588578 del ACAA I

M423 - 19096091 16984211 G>A I

M436 P214; S33; PF3856 rs17315680 18747493 16635613 G>C I

M438 P215; S31; PF3853 rs17307294 16638804 14526924 A>G I

P109 rs373764666 15426005 13314125 C>T I

P217 S23; PF3854 rs7892900 7628484 7760443 C>T I

P259 M507 rs375296284 15591474 13479594 T>G I

S17250 YP204 - 15531354 13419474 G>A I

U179 PF3742 rs2319818 16354708 14242828 G>A I

U250 P222; S118; PF3861 rs17315723 18888200 16776320 C>G I

Z131 S249 - 5845252 5977211 G>A I

Z138 S296 - 15711340 13599460 C>G I

Z139 S338 - 21288655 19126769 G>T I

Z140 S440 - 17863355 15751475 G>A I

Z141 - 7530813 7662772 A>G I

Z161 - 2696497 2828456 C>G I

Z2040 - 15642141 13530261 G>T I

Z2041 - 17571016 15459136 T>C I

Z2539 CTS7362; S4713 - 17443720 15331840 A>G I

Z58 S244 - 9847423 10009814 T>C I

Z59 S246 - 16802360 14690480 G>T I

Z60 S337 - 18234588 16122708 C>G I

Z63 S243 - 14401486 12280783 C>T I

Z74 - 8073670 8205629 G>T I

Z78 - 9154908 9317299 T>C I

P203 M307 rs13447354 22750951 20589065 G>A I; O recurrent

M429 P125; PF3535 rs17306671 14031334 11910628 T>A IJ

P126 rs17250163 21225770 19063884 C>G IJ

M522 L16; S138; PF3493 rs9786714 7173143 7305102 G>A IJKLT

M523 L15; S137; PF3492 rs9786139 6753519 6885478 A>G IJKLT

CTS4800 rs375425280 15830461 13718581 G>A J

F1614 - 9835988 9998379 T>C J

F3133 - 21142273 18980387 C>T J

FGC11 Y3015 rs374330394 18581881 16470001 G>A J

FGC6064 - 14301501 12180795 A>T J

L136 L572; FGC14316 - 7570823 7702782 del T J

L210 - 16492197 14380317 A>T J

L227 - 6859963 6991922 C>T J

L228 S321; PF4895; F4087 rs371968167 7771358 7903317 C>T J

L24 M530; S286; F4168 rs35248080 14286528 12165822 G>A J

L25 S399; PF5345 rs34534058 19136822 17024942 T>C J

L26 S57; Page55; PF5110 rs34459399 22942897 20781011 T>C J

L282 rs377565422 5359116 5491075 C>T J

L283 - 6932663 7064622 C>G J

L558 PF7408 - 10008614 10171005 C>T J

L581 S398; PF5026 - 14870114 12758184 T>G J

L620 rs372746826 5274763 5406722 G>A J

L817 rs199525748 6932171 7064130 G>C J

L827 rs368294560 15541333 13429453 C>T J

L858 rs369778229 9879005 10041396 C>T J

M102 rs2032608 21926112 19764226 G>C J

M12 rs3903 7583480 7715439 G>T J

M158 rs375691065 21716366 19554480 C>T J

M172 Page28; PF4908 rs2032604 14969634 12857709 T>G J

M205 rs2032657 15587509 13475629 T>A J

M267 PF4782 rs9341313 22741818 20579932 T>G J

M304 Page16; PF4609 rs13447352 22749853 20587967 A>C J

M319 rs13447373 15467785 13355905 T>A J

M410 rs371079691 2751678 2883637 A>G J

M497 rs371666197 17419934 15308054 T>C J

M67 S51; PF5137 rs2032628 21878809 19716923 A>T J

M92 rs2032648 21904023 19742137 T>C J

P209 PF4584 rs17315835 19179335 17067455 T>C J

P354 CTS7683; PF5100 rs35874196 17614366 15502486 G>A J

P58 Page8; PF4698 rs34043621 14486667 12365936 T>C J

PF4610 AM01357 - 22757708 20595822 G>C J

PF5008 - 7691561 7823520 T>C J

PF5050 - 22007097 19845211 C>T J

PF5116 rs374310420 4065584 4197543 G>A J

PF5125 - 9089648 9252039 C>G J

PF5132 - 17434361 15322481 A>G J

PF5172 - 7882829 8014788 G>A J

PF5197 Z2397 - 19068737 16956857 G>A J

PF5294 AM00113 - 14727442 12615510 G>A J

PF5401 - 23980955 21834808 C>A J

PF7264 - 7842079 7974038 C>G J

S23154 Z17196 - 21492212 19330326 T>C J

S4924 - 15465507 13353627 G>A J

Y4036 FGC7860 rs375567352 22146827 19984941 C>T J

Y5014 Z17199; FGC17667 - 22521698 20359812 G>A J

Y6304 ZS67; ZS3525 - 9001870 9164261 G>A J

YSC76 YSC0000076 - 8432091 8564050 C>T J

Z1827 CTS2622 rs371349283 14393681 12272977 C>A J

Z1828 CTS15 - 2669716 2801675 C>T J

Z1846 PF5118; CTS1382 - 7372423 7504382 C>T J

Z1884 rs373832646 22797639 20635753 C>T J

Z1889 FGC1687 rs374024296 24435821 22289674 A>G J

Z2215 CTS5368 rs376267849 16227302 14115422 G>A J

Z2220 AM01359 - 2687198 2819157 G>C J

Z2221 PF5160 - 8265737 8397696 G>A J

Z2324 PF4843 rs370120280 19124399 17012519 T>C J

Z2432 - 7508082 7640041 G>T J

Z438 - 22505840 20343954 T>A J

Z500 PF5121 - 8529549 8661508 C>T J

Z575 rs373266392 16328869 14216989 A>T J

Z6049 S17591 - 15783184 13671304 G>A J

Z6064 - 21260216 19098330 G>A J

Z6065 - 18182306 16070426 G>T J

Z640 - 8210480 8342439 T>G J

Z7430 - 23617203 21455317 C>T J

Z7671 - 18151627 16039747 A>C J

Z7700 - 6870824 7002783 C>G J

M526 PF5979 rs2033003 23550924 21389038 A>C K

M9 PF5506 rs3900 21730257 19568371 C>G KLT

L595 - 21739651 19577765 C>T L

M20 PF5570 rs3911 21733454 19571568 A>G L

M22 rs3913 14790163 12678234 A>G L

M2398 rs544021927 8039705 8171664 T>C L

M2481 rs575831025 14629818 12517887 G>A L

M27 rs376303746 21739646 19577760 C>G L

M317 FGC36877 - 22754671..22754672 20592785..20592786 del GA L

M349 rs797012419 2893277 3025236 G>T L

M357 rs377156966 2888252 3020211 C>A L

M76 rs377001539 21757316 19595430 T>G L

Z5926 rs537389634 6766411 6898370 T>C L

L811 PF5565 - 21364708 19202822 C>T LT

P326 L298 rs372687543 8467290 8599249 T>C LT

B254 rs372295336 14102580 11981874 C>A M

B255 rs370472771 21984729 19822843 C>T M

B256 - 2723942 2855901 G>T M

F2561 Page67 rs35852845 17678803 15566923 G>A M

FGC38729 - 7301988 7433947 C>T M

FGC5054 - 18604959 16493079 G>A M

FGC9126 rs113012723 15888442 13776562 G>A M

M10072 rs566812523 18192531 16080651 G>A M

M106 rs2032611 21866424 19704538 A>G M

M177 SRY9138 rs369688174 2658869 2790828 G>A M

M186 rs2032681 14923461 12811526 del G M

M189 rs2032606 14945705 12833779 G>T M

M230 rs9341277 15481372 13369492 T>A M

M254 rs9341297 15022763..15022764 12910852..12910853 AG>TACTATGTTTACTATGATGC M

M353 rs377239181 17309267 15197387 G>A M

M5 P73 rs3896 21609946 19448060 C>T M

P117 - 14819693 12707760 G>T M

P118 - 15019806 12907895 del C M

P202 rs369616152 14001024 11880318 T>A M

P256 - 8685230 8817189 G>A M

P308 - 15409573 13297693 C>T M

P315 - 6740065 6872024 C>A M

P336 rs13304043 9004921 9167312 G>A M

P34 - 23667187;23690727;24046710;24567083;24567120 21505301;21528841;21900563;22420936;22420973 G>A M multicopy

P377 - 5847373 5979332 A>G M

P378 - 4093081 4225040 C>T M

P397 - 28759645 26613498 C>T M

P399 - 13563083 11407407 C>T M

P405 F3744 rs566569730 8391108 8523067 G>T M

P60 - 14484471 12363740 T>C M

P79 rs374630929 6740377 6872336 T>C M

P87 - 15019719 12907808 A>C M

Page93 S322 rs34486382 15481435 13369555 C>T M

PR2099 rs369017623 16328755 14216875 C>T M

rs2381324 rs2381324 28737364 26591217 G>A M

rs368228091 rs368228091 21612650 19450764 G>A M

rs368587345 rs368587345 13938612 11817906 C>T M

rs370756633 rs370756633 17800094 15688214 T>G M

rs370759530 rs370759530 7389972 7521931 G>A M

rs372737012 rs372737012 7982583 8114542 G>T M

rs377052367 rs377052367 8599643 8731602 A>G M

SK1806 - 8535703 8667662 C>T M

SK1822 - 16404029 14292149 A>G M

SK1824 - 19287466 17175586 C>A M

SK1877 - 8545089 8677048 C>T M

SK1882 - 18110438 15998558 C>T M

Z30835 - 16324762 14212882 C>A M

Z31007 - 15576350 13464470 G>T M

Z33118 AM00651 rs368850080 15994105 13882225 G>A M

Z33330 - 16960342 14848462 C>T M

Z33345 - 21284118 19122232 C>T M

L405 PF5990 rs9786602 28731917 26585770 A>C MP

P331 M1221; PF5911; YSC0000186 rs9785994 16222561 14110681 C>T MP

F1154 - 8381313 8513272 T>C N

F1206 - 8440417 8572376 C>T N

F2569 - 17703598 15591718 A>G N

F2905 - 18954139 16842259 G>C N

F2930 M3285; CTS1879 - 14108344 11987638 G>A N

F3163 - 21231863 19069977 G>A N

F4201 - 16256046 14144166 C>A N

F830 M1787 rs556177853 6801568 6933527 T>C N

L1025 - 14126006 12005300 G>A N

L1026 Z1973 - 21892577..21892578 19730691..19730692 del TA N

L1034 - 21646398 19484512 G>C N

L392 - 6753265 6885224 A>C N

L550 S431 - 21286248 19124362 C>T N

L666 F1008 - 7570816 7702775 G>A N

L708 Z1951 - 7629512 7761471 C>A N

L729 rs371086975 19431608 17319728 A>C N

L735 M2291; CTS11499 rs570674159 23139617 20977731 G>T N

L839 F4325 - 22974783 20812897 A>G N

M178 rs377214926 21741755 19579869 C>T N

M231 Page91 rs9341278 15469724 13357844 G>A N

M2783 - 9850683 10013074 A>G N

M46 Tat; Page70 rs34442126 14922583 12810648 T>C N

P105 - 15422962 13311082 C>T N

P43 - 21880973 19719087 G>A N

P63 - 21843827..21843828 19681941..19681942 ins C N

VL25 - 13525150 11369474 C>T N

VL29 CTS2929 - 14570424 12458624 T>C N

Y6503 FGC28528 - 23592250 21430364 C>T N

Z1925 - 7246954 7378913 del A N

Z1935 - 19219721 17107841 A>G N

Z1936 - 21463326 19301440 C>T N

Z1941 - 8557714 8689673 T>G N

Z4762 - 3821237 3953196 A>C N

M214 Page39 rs2032674 15471925 13360045 T>C NO

CTS713 - 6969538 7101497 A>G O

F11 KL4 rs17276393 2815303 2947262 C>G O

F1252 - 8492876 8624835 C>T O

F1462 - 8910408 9042367 T>C O

F444 - 17880466 15768586 C>T O

F449 - 17917402 15805522 G>A O

F75 M1297; AM00538 - 7410009 7541968 T>C O

F789 M1283 rs375155527 6629330 6761289 T>A O

F964 - 7421428 7553387 C>T O

JST002611 rs2075181 7546726 7678685 C>T O

K4 rs201422097 21314376 19152490 C>T O

K7 - 8239237 8371196 C>A O

KL1 L465 rs17276338 18842841 16730961 G>T O

M110 rs373112617 21907097 19745211 T>C O

M117 - 21765312..21765315 19603426..19603429 del AGAT O

M119 rs72613040 21762685 19600799 T>G O

M122 rs78149062 21764674 19602788 A>G O

M133 - 21716327 19554441 del T O

M134 rs200634940 21716218 19554332 del C O

M175 rs2032678 15508706..15508710 13396826..13396830 del TTCTC O

M176 SRY465; Page63 rs11575897 2655180 2787139 G>A O

M188 rs2032605 14924869 12812934 C>T O

M268 rs13447443 22739301 20577415 A>G O

M324 rs13447361 2821786 2953745 G>C O

M50 rs2032632 21868672 19706786 T>C O

M7 rs3898 4078217 4210176 C>G O

M95 rs2032650 21938444 19776558 C>T O

N6 AM01828 rs3212283 21889536 19727650 G>A O

P164 rs17316007 14001232 11880526 A>G O

P186 rs16981290 7568568 7700527 C>A O

P197 rs17276358 19179463 17067583 G>T O

P200 rs17316592 18560005 16448125 T>G O

P201 JST021354 rs2267801 2828196 2960155 T>C O

P31 rs200861659 14495243 12383440 T>C O

P49 rs200786729 14496407 12384612 A>T O

Page23 rs34893929 15999244 13887364 G>A O

PK4 rs367562925 21285962 19124076 A>T O

P295 PF5866; S8 rs895530 7963031 8094990 T>G P

CTS11969 M930 - 23391298 21229412 T>G Q

CTS11970 M931 - 23391307 21229421 G>C Q

F1096 - 8087573 8219532 A>T Q

F1215 - 8454150 8586109 A>C Q

F1251 - 8491335 8623294 T>G Q

F3243 - 21723218 19561332 T>C Q

L191 - 2887379 3019338 del A Q

L232 S432 - 17516095 15404215 G>A Q

L245 - 5675090 5807049 C>G Q

L275 - 19136888 17025008 G>A Q

L314 - 15587574 13475694 A>C Q

L330 - 17766807 15654927 T>C Q

L334 - 14482079 12361348 G>A Q

L472 F903 rs35724598 7014317 7146276 G>C Q

L527 - 17661303 15549423 C>A Q

L529 - 6931700 7063659 A>G Q

L53 S326 rs34724285 21642296 19480410 G>A Q

L54 rs34954951 23292782 21130896 G>A Q

L56 S324 rs34703625 8148869 8280828 G>A Q

L57 rs34864948 15574102 13462222 G>A Q

L804 - 14028228 11907522 T>A Q

L805 - 16699291 14587411 A>G Q

L940 F835 - 6846280 6978239 C>G Q

M120 rs374472129 21907394 19745508 T>C Q

M143 rs376134474 21889818 19727932 G>T Q

M19 rs3910 21733231 19571345 T>A Q

M242 rs8179021 15018582 12906671 C>T Q

M25 rs371369701 21866664 19704778 G>C Q

M3 rs3894 19096363 16984483 G>A Q

M346 - 2887156 3019115 C>G Q

M378 Page100 rs72625304 15027507 12915595 A>G Q

M557 - 15014658..15014660 12902746..12902748 del TAC Q

MEH2 rs4252209 4925637 5057596 G>T Q

MG2 - 14998418 12886503 T>C Q

NWT01 F746 - 2888083 3020042 C>G Q

P36 - 14496441 12384646 G>T Q

SA01 - 15014716 12902804 C>T Q

Z780 M971 - 8510540 8642499 C>T Q

M45 PF5962 rs2032631 21867787 19705901 G>A QR

M74 N12; PF5963 rs2032635 21889767 19727881 G>A QR

CTS11962 - 23383729 21221843 C>T R

CTS1211 S3357 - 7271722 7403681 C>A R

CTS3402 S3361 - 14896020 12784086 A>G R

CTS4065 Z2355; S1221 rs199595814 15372323 13260443 A>C R

CTS4385 Z2463 - 15625999 13514119 A>T R

CTS6 Z2469; S3403 - 2657349 2789308 T>C R

DF13 S521; CTS241 rs373989227 2836431 2968390 A>C R

DF17 S455; AM00499 - 6631746 6763705 T>G R

DF19 S232 - 14301499 12180793 G>T R

DF21 S192 rs138322855 9878915 10041306 C>T R

DF23 S193 - 17774409 15662529 G>A R

DF27 S250 - 21380200 19218314 G>A R

DF41 S524; CTS6581 rs372620228 16992602 14880722 T>C R

DF49 S474; AM01922 - 22735599 20573713 G>A R

DF63 S522; CTS300 - 2883986 3015945 T>C R

DF99 Z6001; S11987 - 8829491 8961450 C>A R

FGC396 YFS036858 - 6997451 7129410 C>T R

L11 S127; PF6539 rs9786076 17844018 15732138 T>C R

L1335 S530 - 23154201 20992315 A>G R

L2 S139 rs2566671 5755550 5887509 C>T R

L20 S144 rs7067305 14231292 12110586 G>A R

L23 S141; PF6534 rs9785971 6753511 6885470 G>A R

L238 S182 rs35199432 21253443 19091557 A>G R

L260 S222 - 18248830 16136950 G>T R

L295 rs368558585 4929885 5061844 G>A R

L365 S468 - 21628667 19466781 T>C R

L389 PF6531 rs1358368 28733101 26586954 C>G R

L448 S200 - 6931809 7063768 C>T R

L47 S170 rs34283263 22178569 20016683 G>A R

L48 S162 rs13303755 23612197 21450311 G>T R

L513 DF1; S215 - 7340450 7472409 C>T R

L52 PF6541 rs13304168 14641193 12529262 C>T R

L657 S347 - 14159864 12039158 G>A R

L754 PF6269; YSC0000022 rs7893073 22889018 20727132 G>A R

L757 rs9786111 19054889 16943009 C>T R

M124 rs372706460 21764501 19602615 G>A R

M17 rs3908 21733168 19571282 del G R

M173 P241; Page29 rs2032624 15026424 12914512 A>C R

M198 PF6238 rs2020857 15030752 12918840 C>T R

M207 UTY2; Page37 rs2032658 15581983 13470103 A>G R

M222 USP9Y+3636; Page84 rs20321 14902414 12790481 G>A R

M269 rs9786153 22739367 20577481 T>C R

M306 S1; PF6147 rs1558843 22750583 20588697 C>A R

M343 PF6242 rs9786184 2887824 3019783 C>A R

M412 L51; S167; PF6536 rs9786140 8502236 8634195 G>A R

M415 PF6251 rs9786194 9170545 9332936 C>A R

M417 rs17316771 8533735 8665694 G>A R

M420 L146; PF6229 rs17250535 23473201 21311315 T>A R

M448 L122; PF6237 rs17222202 16520444 14408564 T>A R

M458 PF6241 rs375323198 24366464 22220317 A>G R

M478 - 23444054 21282168 T>C R

M479 PF6107 rs372157627 20834667 18672781 C>T R

M520 PF6410 rs9786486 4446430 4578389 T>A R

M529 L21; S145 rs11799226 15654428 13542548 C>G R

M558 CTS3607; S3363 - 15063588 12951680 T>C R

M582 CTS2253; Z2474 - 14236070 12115364 T>G R

M73 rs2032634 21888874..21888875 19726988..19726989 del GT R

M780 Y26; AM00483 rs548818011 21610995 19449109 C>T R

P297 PF6398 rs9785702 18656508 16544628 G>C R

P310 S129; PF6546 rs9786283 18907236 16795356 A>C R

P311 S128; PF6545 rs9785659 18248698 16136818 A>G R

P312 S116; PF6547 rs34276300 22157311 19995425 C>A R

P314 S220 rs368505307 2888672 3020631 T>C R

PF7545 - 15446956 13335076 A>C R

PH1165 - 14338481 12217776 C>T R

S11345 - 8362542 8494501 G>A R

S2863 - 16614118 14502238 C>G R

S2894 - 17803051 15691171 G>T R

S3058 FGC3188 - 15683936 13572056 T>C R

S3485 CTS6059 - 16643901 14532021 G>A R

S47 - 14515040 12403245 C>T R

U106 M405; S21 rs16981293 8796078 8928037 C>T R

U152 S28; PF6570 rs1236440 15333149 13221267 C>T R

U198 M467; S29 rs17222279 16839499 14727619 G>A R

V88 PF6279 rs180946844 4862861 4994820 C>T R

Y1280 - 4625712 4757671 A>G R

Y1285 - 7536663 7668622 A>C R

Y1332 - 14301872 12181166 C>A R

Y1336 - 24358540 22212393 A>G R

Y3550 FGC11134 - 21383466 19221580 T>A R

Y4 - 15808526 13696646 C>A R

Y40 - 21577643 19415757 C>T R

Y7771 - 7366284 7498243 G>T R

Y9 AM00481 - 19383352 17271472 C>A R

Z142 S211 - 16787539 14675659 A>G R

Z144 - 14544130 12432331 T>G R

Z145 PF6578; S371 - 16454755 14342875 G>T R

Z146 S483; PF6584 - 23627289 21465403 C>T R

Z156 S264 - 15780341 13668461 A>G R

Z18 S493; YSC0000053 - 14991735 12879820 G>A R

Z192 - 28688760 26542613 T>C R

Z195 S227 - 17922066 15810186 G>A R

Z196 S355 - 21033704..21033705 18871818..18871819 del AT R

Z198 S228; AM01891 - 16593834 14481954 G>T R

Z209 S230 - 15508140 13396260 T>G R

Z2103 CTS1078 - 7186135 7318094 G>C R

Z2105 - 15747432 13635552 C>A R

Z2122 S4576; AM00477 - 14477397 12356666 G>A R

Z2124 - 4521678 4653637 C>G R

Z2125 rs570569843 6892233 7024192 C>T R

Z214 S348 rs529210236 21827794 19665908 A>C R

Z216 - 18021350 15909470 C>T R

Z220 S356 rs538725564 16310705 14198825 G>A R

Z225 S225; F1343; V2334 - 8603396 8735355 A>G R

Z229 S359; V2059 - 8469661 8601620 G>A R

Z246 S280 - 7061380 7193339 T>G R

Z249 S279 - 5818205 5950164 T>C R

Z251 S470 - 8736334 8868293 G>A R

Z253 S218 - 7193034 7324993 G>A R

Z2534 S868 - 19033817 16921937 T>C R

Z2542 CTS8221 rs138975640 17885577 15773697 C>T R

Z255 S219 - 15702775 13590895 T>C R

Z2552 - 4217182 4349141 C>T R

Z2557 FGC20747 - 13829071 11708365 C>A R

Z2560 - 21392475 19230589 C>T R

Z262 AM01890 - 16320197 14208317 C>T R

Z272 - 22440376 20278490 G>A R

Z274 S229 - 22293941 20132055 C>G R

Z283 S339; PF6217 rs112309702 21976303 19814417 T>A R

Z284 S221 - 8717196 8849155 C>G R

Z287 S223 - 17293093 15181213 C>T R

Z288 S345 - 18175765 16063885 G>C R

Z2961 - 7855252 7987211 C>T R

Z30 S271 - 22971392 20809506 C>G R

Z301 S499 rs79683764 14181107 12060401 C>T R

Z31644 FGC40707 - 25302830 23156683 A>G R

Z331 S1743 - 17375104 15263224 C>T R

Z34 S368 - 18405864 16293984 T>C R

Z34609 - 27929277 25783130 A>C R

Z36 S206 - 4961118 5093077 A>G R

Z367 S255 rs7067387 9810794 9973185 T>C R

Z381 S263 rs34001725 7246726 7378685 C>T R

Z49 - 28462237 26316090 G>T R

Z56 PF6601 - 18848155 16736275 G>A R

Z645 S224; PF6162 rs111731595 8245045 8377004 C>T R

Z647 S441; PF6158 rs112284571 7683058 7815017 G>A R

Z8057 FGC3854; AM01882 rs747447655 15850306 13738426 G>C R

Z9 S268 - 6788390 6920349 C>T R

Z91 S204 rs111908460 16474793 14362913 G>A R

Z92 S205 rs111474733 17585001 15473121 C>G R

Z93 S202; F992 - 7552356 7684315 G>A R

Z94 F3105; S340 - 21043448 18881562 T>C R

Z95 F3568 - 23956870 21810723 C>T R

L131 rs2215828 19372808 17260928 C>T T

L162 Page21 rs34179999 16019072 13907192 G>C T

L208 Page2 rs35815655 6736443 6868402 C>T T

M184 USP9Y+3178; Page34 rs20320 14898163 12786229 G>A T

M70 Page46; PF5662 rs2032672 21893881 19731995 A>C T

Y11151 FGC1350 - 7857464 7989423 C>G T

Z709 - 6890722 7022681 T>C T

F549 M2335; S22380 - 19513070 17401190 C>T X

F650 M2346 rs72615053 23617006 21455120 G>A X

M2308 Z4842 - 7690182 7822141 A>T X