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Review
. 2022 Dec 10;10(12):772.
doi: 10.3390/toxics10120772.

Genetic Diversity of Microcystin Producers (Cyanobacteria) and Microcystin Congeners in Aquatic Resources across Africa: A Review Paper

Affiliations
Review

Genetic Diversity of Microcystin Producers (Cyanobacteria) and Microcystin Congeners in Aquatic Resources across Africa: A Review Paper

Mathias Ahii Chia et al. Toxics. .

Abstract

Microcystins are produced by multifaceted organisms called cyanobacteria, which are integral to Africa's freshwater environments. The excessive proliferation of cyanobacteria caused by rising temperature and eutrophication leads to the production and release of copious amounts of microcystins, requiring critical management and control approaches to prevent the adverse environmental and public health problems associated with these bioactive metabolites. Despite hypotheses reported to explain the phylogeography and mechanisms responsible for cyanobacterial blooms in aquatic water bodies, many aspects are scarcely understood in Africa due to the paucity of investigations and lack of uniformity of experimental methods. Due to a lack of information and large-scale studies, cyanobacteria occurrence and genetic diversity are seldom reported in African aquatic ecosystems. This review covers the diversity and geographical distribution of potential microcystin-producing and non-microcystin-producing cyanobacterial taxa in Africa. Molecular analyses using housekeeping genes (e.g., 16S rRNA, ITS, rpoC1, etc.) revealed significant sequence divergence across several cyanobacterial strains from East, North, West, and South Africa, but the lack of uniformity in molecular markers employed made continent-wise phylogenetic comparisons impossible. Planktothrix agardhii, Microcystis aeruginosa, and Cylindrospermopsis raciborskii (presently known as Raphidiopsis raciborskii) were the most commonly reported genera. Potential microcystin (MCs)-producing cyanobacteria were detected using mcy genes, and several microcystin congeners were recorded. Studying cyanobacteria species from the African continent is urgent to effectively safeguard public and environmental health because more than 80% of the continent has no data on these important microorganisms and their bioactive secondary metabolites.

Keywords: African continent; biological risk; cyanobacteria; cyanotoxin; mcy genes; molecular markers; water supply.

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Conflict of interest statement

The authors declare no conflict of interest.

Figures

Figure 1
Figure 1
Microcystin chemical structure generalized as cyclo-D-Ala1-X2-D-MeAsp3-Z4-Adda5-D-Glu6-Mdha7, where X and Z denote the highly variable L-amino acids present at the second and fourth positions, with possible different combinations of seven amino acids that can produce different microcystin variants (modified from Butler et al. [13]).
Figure 2
Figure 2
Microcystin congeners. (A) Microcystin-AR, (B) Microcystin-LF, (C) Microcystin-LR, (D) Microcystin –LY. Source: PubChem.
Figure 3
Figure 3
Neighbor-joining phylogenetic tree of the 16S rDNA gene of bloom samples and isolated cyanobacteria from Africa and other continents. The bootstrap consensus tree was inferred from 1000 replicates, and the evolutionary distances were computed using the maximum composite likelihood method. All ambiguous positions were removed for each sequence pair (pairwise deletion option). There were a total of 1462 bp in the final dataset. Evolutionary analyses were conducted in MEGA X version 11 for macOS.
Figure 4
Figure 4
Phylogenetic tree constructed using the neighbor-joining method of the ITS1 sequences’ gene of cyanobacteria detected from studies on the continent. Branches corresponding to partitions reproduced in less than 50% of bootstrap replicates are collapsed. The percentage of replicate trees in which the associated taxa clustered together in the bootstrap test (1000 replicates) are shown next to the branches. The evolutionary distances were computed using the Kimura 2-parameter method and are in the units of the number of base substitutions per site. This analysis involved 34 nucleotide sequences. All ambiguous positions were removed for each sequence pair (pairwise deletion option). There was a total of 539 bp in the final dataset. Evolutionary analyses were conducted in MEGA X version 11.
Figure 5
Figure 5
UPGMA phylogenetic tree of the mcyE gene of blooms and isolated cyanobacteria from Africa and other continents. The bootstrap consensus tree was inferred from 1000 replicates, and the evolutionary distances were computed using the maximum composite likelihood method. The analysis involved 54 nucleotide sequences. All ambiguous positions were removed for each sequence pair (pairwise deletion option). There was a total of 847 bp in the final dataset. Evolutionary analyses were conducted in MEGA X version 11 for macOS.

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