Draft Genome Sequences of Nine Cyanobacterial Strains from Diverse Habitats

doi:10.1128/genomeA.01676-16

. 2017 Mar 2;5(9):e01676-16.

doi: 10.1128/genomeA.01676-16.

Draft Genome Sequences of Nine Cyanobacterial Strains from Diverse Habitats

Tao Zhu ¹, Shengwei Hou ², Xuefeng Lu ³, Wolfgang R Hess ⁴

Affiliations

¹ Key Laboratory of Biofuels, Shandong Provincial Key Laboratory of Synthetic Biology, Qingdao Institute of Bioenergy and Bioprocess Technology, Chinese Academy of Sciences, Beijing, China.
² Genetics and Experimental Bioinformatics, Faculty of Biology, University of Freiburg, Freiburg im Breisgau, Germany.
³ Key Laboratory of Biofuels, Shandong Provincial Key Laboratory of Synthetic Biology, Qingdao Institute of Bioenergy and Bioprocess Technology, Chinese Academy of Sciences, Beijing, China lvxf@qibebt.ac.cn wolfgang.hess@biologie.uni-freiburg.de.
⁴ Genetics and Experimental Bioinformatics, Faculty of Biology, University of Freiburg, Freiburg im Breisgau, Germany lvxf@qibebt.ac.cn wolfgang.hess@biologie.uni-freiburg.de.

PMID: 28254973
PMCID: PMC5334580
DOI: 10.1128/genomeA.01676-16

Draft Genome Sequences of Nine Cyanobacterial Strains from Diverse Habitats

Tao Zhu et al. Genome Announc. 2017.

. 2017 Mar 2;5(9):e01676-16.

doi: 10.1128/genomeA.01676-16.

Authors

Tao Zhu ¹, Shengwei Hou ², Xuefeng Lu ³, Wolfgang R Hess ⁴

Affiliations

¹ Key Laboratory of Biofuels, Shandong Provincial Key Laboratory of Synthetic Biology, Qingdao Institute of Bioenergy and Bioprocess Technology, Chinese Academy of Sciences, Beijing, China.
² Genetics and Experimental Bioinformatics, Faculty of Biology, University of Freiburg, Freiburg im Breisgau, Germany.
³ Key Laboratory of Biofuels, Shandong Provincial Key Laboratory of Synthetic Biology, Qingdao Institute of Bioenergy and Bioprocess Technology, Chinese Academy of Sciences, Beijing, China lvxf@qibebt.ac.cn wolfgang.hess@biologie.uni-freiburg.de.
⁴ Genetics and Experimental Bioinformatics, Faculty of Biology, University of Freiburg, Freiburg im Breisgau, Germany lvxf@qibebt.ac.cn wolfgang.hess@biologie.uni-freiburg.de.

PMID: 28254973
PMCID: PMC5334580
DOI: 10.1128/genomeA.01676-16

Abstract

Here, we report the annotated draft genome sequences of nine different cyanobacteria, which were originally collected from different habitats, including hot springs, terrestrial, freshwater, and marine environments, and cover four of the five morphological subsections of cyanobacteria.

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References

1. Tomitani A, Knoll AH, Cavanaugh CM, Ohno T. 2006. The evolutionary diversification of cyanobacteria: molecular-phylogenetic and paleontological perspectives. Proc Natl Acad Sci U S A 103:5442–5447. doi:10.1073/pnas.0600999103. - DOI - PMC - PubMed
1. Stanier RY, Deruelles J, Rippka R, Herdman M, Waterbury JB. 1979. Generic assignments, strain histories and properties of pure cultures of cyanobacteria. Microbiology 111:1–61. doi:10.1099/00221287-111-1-1. - DOI
1. Shih PM, Wu D, Latifi A, Axen SD, Fewer DP, Talla E, Calteau A, Cai F, de Tandeau de Marsac NT, Rippka R, Herdman M, Sivonen K, Coursin T, Laurent T, Goodwin L, Nolan M, Davenport KW, Han CS, Rubin EM, Eisen JA, Woyke T, Gugger M, Kerfeld CA. 2013. Improving the coverage of the cyanobacterial phylum using diversity-driven genome sequencing. Proc Natl Acad Sci U S A 110:1053–1058. doi:10.1073/pnas.1217107110. - DOI - PMC - PubMed
1. Stanier RY, Kunisawa R, Mandel M, Cohen-Bazire G. 1971. Purification and properties of unicellular blue-green algae (order Chroococcales). Bacteriol Rev 35:171–205. - PMC - PubMed
1. Stevens SE, Porter RD. 1980. Transformation in Agmenellum quadruplicatum. Proc Natl Acad Sci U S A 77:6052–6056. doi:10.1073/pnas.77.10.6052. - DOI - PMC - PubMed

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[1] Tomitani A, Knoll AH, Cavanaugh CM, Ohno T. 2006. The evolutionary diversification of cyanobacteria: molecular-phylogenetic and paleontological perspectives. Proc Natl Acad Sci U S A 103:5442–5447. doi:10.1073/pnas.0600999103. - DOI - PMC - PubMed

[2] Tomitani A, Knoll AH, Cavanaugh CM, Ohno T. 2006. The evolutionary diversification of cyanobacteria: molecular-phylogenetic and paleontological perspectives. Proc Natl Acad Sci U S A 103:5442–5447. doi:10.1073/pnas.0600999103. - DOI - PMC - PubMed

[3] Stanier RY, Deruelles J, Rippka R, Herdman M, Waterbury JB. 1979. Generic assignments, strain histories and properties of pure cultures of cyanobacteria. Microbiology 111:1–61. doi:10.1099/00221287-111-1-1. - DOI

[4] Stanier RY, Deruelles J, Rippka R, Herdman M, Waterbury JB. 1979. Generic assignments, strain histories and properties of pure cultures of cyanobacteria. Microbiology 111:1–61. doi:10.1099/00221287-111-1-1. - DOI

[5] Shih PM, Wu D, Latifi A, Axen SD, Fewer DP, Talla E, Calteau A, Cai F, de Tandeau de Marsac NT, Rippka R, Herdman M, Sivonen K, Coursin T, Laurent T, Goodwin L, Nolan M, Davenport KW, Han CS, Rubin EM, Eisen JA, Woyke T, Gugger M, Kerfeld CA. 2013. Improving the coverage of the cyanobacterial phylum using diversity-driven genome sequencing. Proc Natl Acad Sci U S A 110:1053–1058. doi:10.1073/pnas.1217107110. - DOI - PMC - PubMed

[6] Shih PM, Wu D, Latifi A, Axen SD, Fewer DP, Talla E, Calteau A, Cai F, de Tandeau de Marsac NT, Rippka R, Herdman M, Sivonen K, Coursin T, Laurent T, Goodwin L, Nolan M, Davenport KW, Han CS, Rubin EM, Eisen JA, Woyke T, Gugger M, Kerfeld CA. 2013. Improving the coverage of the cyanobacterial phylum using diversity-driven genome sequencing. Proc Natl Acad Sci U S A 110:1053–1058. doi:10.1073/pnas.1217107110. - DOI - PMC - PubMed

[7] Stanier RY, Kunisawa R, Mandel M, Cohen-Bazire G. 1971. Purification and properties of unicellular blue-green algae (order Chroococcales). Bacteriol Rev 35:171–205. - PMC - PubMed

[8] Stanier RY, Kunisawa R, Mandel M, Cohen-Bazire G. 1971. Purification and properties of unicellular blue-green algae (order Chroococcales). Bacteriol Rev 35:171–205. - PMC - PubMed

[9] Stevens SE, Porter RD. 1980. Transformation in Agmenellum quadruplicatum. Proc Natl Acad Sci U S A 77:6052–6056. doi:10.1073/pnas.77.10.6052. - DOI - PMC - PubMed

[10] Stevens SE, Porter RD. 1980. Transformation in Agmenellum quadruplicatum. Proc Natl Acad Sci U S A 77:6052–6056. doi:10.1073/pnas.77.10.6052. - DOI - PMC - PubMed

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Draft Genome Sequences of Nine Cyanobacterial Strains from Diverse Habitats

Affiliations

Draft Genome Sequences of Nine Cyanobacterial Strains from Diverse Habitats

Authors

Affiliations

Abstract

References

LinkOut - more resources

Full Text Sources

Other Literature Sources

Molecular Biology Databases

Research Materials