Parallel Analysis Examples

Examples of parallel analysis scripts for Timeline, and other cases
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REQUIREMENTS: VMD Version 1.9.2 or greater
DESCRIPTION:
Parallel analysis examples that work with Timeline:
 sasa - calculate solvent accessible surface area for all residues
 crosscorr - calculate MDFF cross-correlation quality-of-fit score 
 for user-defined set of selections
 The analysis runs produce .tml files suitable for reading by the 
 VMD TimeLine plugin. The .tml files contain per-residue or 
 per-user-selection analysis results for every specified time step.
Notes:
 See each subdirectory README for a sample command to run a parallel analysis.
DOWNLOAD THE FILE:
	parallel-analysis.tar.gz
AUTHOR:
 Barry Isralewitz (barry@ks.uiuc.edu)