Highlight Bases
highlight bases 1.1
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REQUIREMENTS: VMD Version 1.8 or greater
DESCRIPTION:
highlight_bases emphasizes nucleic acid bases in DNA.
It draws tiny squares for each base, with the squares
color-coded by base type. Warning: This procedure
does not work for all bases (i.e. due to atom-naming
conventions)
PROCEDURES:
highlight_bases - pass the molecule id to it in order
to draw tiny squares corresponding to each base
EXAMPLE USAGE
highlight_bases top (draws squares for bases of top
molecule)
EXAMPLE OUTPUT
A lines representation of DNA,
with bases highlighted using highlight_bases
DOWNLOAD THE FILE:
highlight_bases.tcl
AUTHOR:
Andrew Dalke (dalke@ks.uiuc.edu)