Date
Time/Loc
Speaker
Title
Video
06/06/07
4:00pm, S360
Jesus Izaguirre, Stanford University
Normal mode splitting of Langevin dynamics applied to biomolecules
Abstract
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Unrestricted Access
06/01/07
9:00am, S360
Eric Westhof, Université Louis Pasteur, France
(Special Seminar)
Non-Watson-Crick Base Pairs, RNA Motifs & RNA Networks
Abstract
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Unrestricted Access
05/23/07
4:00pm, S360
Ellen Kuhl, Stanford University
Continuum biomechanics - pantha psiloni
Abstract
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Unrestricted Access
05/16/07
4:00pm, S360
Gunnar Schroeder, Stanford University
Conformational sampling under low resolution experimental restraints
Abstract
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Unrestricted Access
05/09/07
4:00pm, S360
Tamar Shinar, Stanford University
Hybrid Simulation of Deformable Solids
Abstract
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Unrestricted Access
05/02/07
4:00pm, S360
Xuhui Huang, Stanford University
Exploring free energy landscapes of RNA folding by all-atom simulations using Replica Exchange Sampling Method
Abstract
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Unrestricted Access
04/25/07
4:00pm, S360
Peggy Yao, Stanford University
Efficient Algorithms to Sample Closed Clash-Free Conformations of Protein Loops
Abstract
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Unrestricted Access
04/20/07
4:00pm, Auditorium
Jeff Peng, Notre Dame
Understanding Motions Underlying Protein-Protein Binding via NMR
Abstract
04/18/07
4:00pm, S360
Eftychios Sifakis, Stanford University
The Technological Legacy of Virtual Human Simulation
Abstract
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Unrestricted Access
04/11/07
4:00pm, S360
Victoria Howle, Sandia National Laboratories
Preconditioners Based on Algebraic Commutators for Incompressible Navier-Stokes Equations
Abstract
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Restricted Access
04/04/07
4:00pm, S360
Arthur Olson, The Scripps Research Institute
Tangible Interfaces for Structural Molecular Biology
Abstract
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Unrestricted Access
03/28/07
4:00pm, S360
Darryl Thelen, University of Wisconsin
Simulation of Human Locomotion: Computational Techniques and Applications in Rehabilitation
Abstract
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Restricted Access
03/21/07
4:00pm, S360
Bio-molecular electrostatics for everyone: novel fast algorithms and web-based applications
Abstract
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Unrestricted Access
03/14/07
4:00pm
S360
Andrew McCulloch, University of California San Diego
Cardiac Systems Biology and Multi-Scale Modeling
Abstract
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Restricted Access
03/07/07
4:00pm
S360
Alex TenEyck, Stanford University
Discontinuous Gelerkin for nonlinear elasticity with applications to the blood vessel
Abstract
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Restricted Access
02/28/07
4:00pm
S360
Jill Higginson, University of Delaware
Speed, asymmetry and muscle coordination during walking
Abstract
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Restricted Access
02/21/07
4:00pm, S360
Peter Fritzson, Linkoping University, Sweden
High Level Mathematical Modeling and Simulation with Modelicausing OpenModelica on Biological and Medical Applications
Abstract
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Restricted Access
02/14/07
4:00pm, S360
Ronald Germain, National Institutes of Health
New Software for Complex Multiscale Spatially-resolved Modeling and Simulation: A Focus on the Biology, Not the Math
Abstract View Video
Restricted Access
02/07/07
4:00pm, S360
Pengyu Ren,
Uiversity of Texas at Austin
Coarse-Grained Physical Model for RNA
Abstract
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Restricted Access
01/31/07
4:00pm, S360
Jeffrey Reinbolt, Stanford University
Neuromuscular DBP Science: Investigating Stiff-Knee Gait
Abstract
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Restricted Access
01/24/07
4:00pm S360
Samuel Flores, Yale
Protein hinge motion prediction: Solving the problem of induced fit
Abstract
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Restricted Access
01/17/07
4:00pm, S360
Patrice Koehl, UC Davis
Geometry for Biomolecules
Abstract
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Restricted Access
01/10/07
4:00pm, S360
Michael Sherman, Stanford University
SimTK Core toolkit (including Simbody): design, progress, and plans
Abstract
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Unrestricted Access
12/13/06
4:00pm, S360
Adam Godzik, University of California San Diego
Evolutionary flexibility in protein structures – what physics can learn from biology
Abstract
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Restricted Access
12/06/06
4:00pm, S361
Vijay Pande, Stanford University
New methods for long timescale dynamics
Abstract
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Restricted Access
11/29/06
4:00pm, S360
Magda Jonikas Stanford University
Coarse-grained modeling of RNA structure
Abstract
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Restricted Access
11/15/06
4:00pm, S361
Leo Guibas,
Stanford University
Is There Some Geometry in Your Physics?
Abstract
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Restricted Access
11/08/06
4:00pm, S360
Rudranarayan M Mukherjee, Rensselaer Polytechnic Institute, NY
Multibody Dynamics Algorithms for Biomolecular Simulations
Abstract
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11/01/06
4:00pm, S360
Tony Sherbondy, Stanford University
In vivo measurement of anisotropic tissue microstructure arrangement using most likely connections through diffusion imaging data
Abstract
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10/18/06
4:00pm, S360
Peter Kasson, Stanford University
Understanding membrane fusion via molecular
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10/11/06
4:00pm, S360
Paul Mitiguy, Stanford University
Training for Physics-based Simulation of Biological Structures
Abstract
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Restricted Access
10/04/06
4:00pm, S361
Alberto Figueroa , Stanford University
The Coupled-Momentum Method for Fluid-Structure Interactions: Verification with Womersley Elastic Tube Theory and Applications to Large-Scale Subject Specific Models
Abstract View Video
Restricted Access
09/27/06
4:00pm, S361
Russ Altman and Scott Delp, Stanford University
Challenges and Future Directions for Simbios
Abstract
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Restricted Access
9/13/06
4:15pm, S360
Anthony Nicholls,
OpenEye Scientific Software
20 years of wasted CPU time: A physicist's approximation of molecular modeling
Abstract View Video
Unrestricted Access
8/21/06
3pm, S360
Warren DeLano
DeLano Scientific LLC
An Introduction to PyMOL: Visualization and Animation
Abstract