Microbes and Environments
Online ISSN : 1347-4405
Print ISSN : 1342-6311
ISSN-L : 1342-6311
Regular Papers
The Distribution of a Phage-Related Insertion Sequence Element in the Cyanobacterium, Microcystis aeruginosa
Sotaro Kuno, Takashi Yoshida, Ryoma Kamikawa, Naohiko Hosoda, Yoshihiko Sako
Author information
  • Sotaro Kuno

    Department of Agriculture, Kyoto University

  • Takashi Yoshida

    Department of Agriculture, Kyoto University

  • Ryoma Kamikawa

    Center for Computational Sciences and Institute of Biological Sciences, University of Tsukuba

  • Naohiko Hosoda

    Department of Marine Bioscience, Fukui Prefectural University

  • Yoshihiko Sako

    Department of Agriculture, Kyoto University

Corresponding author

ORCID
Keywords: cyanobacteria, Microcystis, cyanophage, insertion sequence, horizontal gene transfer
JOURNAL FREE ACCESS

2010 Volume 25 Issue 4 Pages 295-301

View "Advance Publication" version (August 25, 2010).
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  • Published: 2010 Received: April 12, 2010 Available on J-STAGE: December 03, 2010 Accepted: July 27, 2010 Advance online publication: August 25, 2010 Revised: -
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Abstract
The cyanophage Ma-LMM01, specifically-infecting Microcystis aeruginosa, has an insertion sequence (IS) element that we named IS607-cp showing high nucleotide similarity to a counterpart in the genome of the cyanobacterium Cyanothece sp. We tested 21 strains of M. aeruginosa for the presence of IS607-cp using PCR and detected the element in strains NIES90, NIES112, NIES604, and RM6. Thermal asymmetric interlaced PCR (TAIL-PCR) revealed each of these strains has multiple copies of IS607-cp. Some of the ISs were classified into three types based on their inserted positions; IS607-cp-1 is common in strains NIES90, NIES112 and NIES604, whereas IS607-cp-2 and IS607-cp-3 are specific to strains NIES90 and RM6, respectively. This multiplicity may reflect the replicative transposition of IS607-cp. The sequence of IS607-cp in Ma-LMM01 showed robust affinity to those found in M. aeruginosa and Cyanothece spp. in a phylogenetic tree inferred from counterparts of various bacteria. This suggests the transfer of IS607-cp between the cyanobacterium and its cyanophage. We discuss the potential role of Ma-LMM01-related phages as donors of IS elements that may mediate the transfer of IS607-cp; and thereby partially contribute to the genome plasticity of M. aeruginosa.
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© Japanese Society of Microbial Ecology / Japanese Society of Soil Microbiology / Taiwan Society of Microbial Ecology
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