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Module Biocaml_sam_deprecated.Transform (.ml)

module Transform:

sig

Low-level, threading-model agnostic transforms (c.f. Biocaml_transform).

val string_to_raw  : ?filename:string ->
 unit ->
 (string,
 (Biocaml_sam_deprecated.raw_item,
 [> Biocaml_sam_deprecated.Error.string_to_raw ])
 Biocaml_internal_utils.Result.t)
 Biocaml_transform.t

Create a parsing "stoppable" transform.

val raw_to_string  : unit -> (Biocaml_sam_deprecated.raw_item, string) Biocaml_transform.t

Create a printing "stoppable" transform.

val raw_to_item  : unit ->
 (Biocaml_sam_deprecated.raw_item,
 (Biocaml_sam_deprecated.item, [> Biocaml_sam_deprecated.Error.raw_to_item ])
 Biocaml_internal_utils.Result.t)
 Biocaml_transform.t

Create a transform that lifts raw_items to items

val item_to_raw  : unit ->
 (Biocaml_sam_deprecated.item,
 (Biocaml_sam_deprecated.raw_item,
 [> Biocaml_sam_deprecated.Error.item_to_raw ])
 Biocaml_internal_utils.Result.t)
 Biocaml_transform.t

Create a transform that downgrades items to raw_items

end