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8IP8: Wheat 80S ribosome stalled on AUG-Stop boron dependently

PDB ID: 8IP8 Download
MMDB ID: 242994
PDB Deposition Date: 2023年3月14日
Updated in MMDB: 2024/05
Experimental Method:
electron microscopy
Resolution: 2.9 Å
Source Organism:
Triticum aestivum
Taxonomy Molecule
Triticum aestivum aa, ba, ca, da, ga, ha, ia, ja, ka,
la, ma, na, oa, pa, qa, ra, sa,
ta, ua, va, wa, xa, ya, za, bb,
cb, db, eb, fb, gb, hb, ib, AA,
BA, CA, DA, EA, FA, GA, HA, IA,
JA, KA, LA, MA, NA, OA, PA, QA,
RA, SA, TA, UA, VA, WA, XA, YA,
ZA, AB, BB, CB, DB, EB, FB, GB,
HB, JB, KB, LB, MB, NB, OB, PB,
RB, SB, TB, al, bl, cl, dl
Oryza sativa IB
Similar Structures:
Biological Unit for 8IP8: 81-meric; determined by author
Molecular Components in 8IP8
Label Count Molecule
Proteins (74 molecules)
1
40S Ribosomal Protein Es24
Molecule annotation
1
40S Ribosomal Protein ES8
Molecule annotation
1
40S Ribosomal Protein Es10
Molecule annotation
1
40S Ribosomal Protein Us12
Molecule annotation
1
Rack1
Molecule annotation
1
40S Ribosomal Protein US3
Molecule annotation
1
40S Ribosomal Protein ES4
Molecule annotation
1
40S Ribosomal Protein US7
Molecule annotation
1
40S Ribosomal Protein US9
Molecule annotation
1
40S Ribosomal Protein Us10
Molecule annotation
1
40S Ribosomal Protein Us11
Molecule annotation
1
40S Ribosomal Protein Us13
Molecule annotation
1
40S Ribosomal Protein Us15
Molecule annotation
1
40S Ribosomal Protein Es17
Molecule annotation
1
40S Ribosomal Protein Es19
Molecule annotation
1
40S Ribosomal Protein Us19
Molecule annotation
1
40S Ribosomal Protein Es25
Molecule annotation
1
40S Ribosomal Protein Es28
Molecule annotation
1
40S Ribosomal Protein US8
Molecule annotation
1
40S Ribosomal Protein Us14
Molecule annotation
1
40S Ribosomal Protein Es27
Molecule annotation
1
40S Ribosomal Protein Es30
Molecule annotation
1
40S Ribosomal Protein US2
Molecule annotation
1
40S Ribosomal Protein ES1
Molecule annotation
1
40S Ribosomal Protein Es21
Molecule annotation
1
40S Ribosomal Protein Es26
Molecule annotation
1
40S Ribosomal Protein US4
Molecule annotation
1
40S Ribosomal Protein US5
Molecule annotation
1
40S Ribosomal Protein ES6
Molecule annotation
1
40S Ribosomal Protein ES7
Molecule annotation
1
40S Ribosomal Protein Us17
Molecule annotation
1
40S Ribosomal Protein EL8
Molecule annotation
1
60S Ribosomal Protein El21
Molecule annotation
1
60S Ribosomal Protein El27
Molecule annotation
1
60S Ribosomal Protein UL2
Molecule annotation
1
60S Ribosomal Protein UL5
Molecule annotation
1
60S Ribosomal Protein UL6
Molecule annotation
1
60S Ribosomal Protein Ul14
Molecule annotation
1
60S Ribosomal Protein El15
Molecule annotation
1
60S Ribosomal Protein Ul15
Molecule annotation
1
60S Ribosomal Protein El18
Molecule annotation
1
60S Ribosomal Protein Ul18
Molecule annotation
1
60S Ribosomal Protein El19
Molecule annotation
1
60S Ribosomal Protein Ul22
Molecule annotation
1
60S Ribosomal Protein Ul23
Molecule annotation
1
60S Ribosomal Protein El24
Molecule annotation
1
60S Ribosomal Protein Ul24
Molecule annotation
1
60S Ribosomal Protein El28
Molecule annotation
1
60S Ribosomal Protein El30
Molecule annotation
1
60S Ribosomal Protein El31
Molecule annotation
1
60S Ribosomal Protein El32
Molecule annotation
1
60S Ribosomal Protein El37
Molecule annotation
1
60S Ribosomal Protein El39
Molecule annotation
1
60S Ribosomal Protein El42
Molecule annotation
1
60S Ribosomal Protein El14
Molecule annotation
1
60S Ribosomal Protein El20
Molecule annotation
1
60S Ribosomal Protein El22
Molecule annotation
1
60S Ribosomal Protein El36
Molecule annotation
1
60S Ribosomal Protein Ul29
Molecule annotation
1
60S Ribosomal Protein Ul30
Molecule annotation
1
60S Ribosomal Protein UL3
Molecule annotation
1
60S Ribosomal Protein UL4
Molecule annotation
1
60S Ribosomal Protein Ul13
Molecule annotation
1
60S Ribosomal Protein El43
Molecule annotation
1
60S Ribosomal Protein Ul16
Molecule annotation
1
60S Ribosomal Protein El41
Molecule annotation
1
60S Ribosomal Protein El40
Molecule annotation
1
60S Ribosomal Protein El13
Molecule annotation
1
60S Ribosomal Protein EL6
Molecule annotation
1
60S Ribosomal Protein El33
Molecule annotation
1
60S Ribosomal Protein El38
Molecule annotation
1
60S Ribosomal Protein El29
Molecule annotation
1
60S Ribosomal Protein El34
Molecule annotation
1
Eukaryotic Release Factor 1
Molecule annotation
Nucleotides(7 molecules)
1
18S Ribosomal RNA
Molecule annotation
1
60S Ribosomal RNA
Molecule annotation
1
5.8s Ribosomal RNA
Molecule annotation
1
5S Ribosomal RNA
Molecule annotation
1
mRNA
Molecule annotation
1
Trnai
Molecule annotation
1
CCA END of E-trna
Molecule annotation
Chemicals and Non-standard biopolymers (311 molecules)
1
307
2
4
* Click molecule labels to explore molecular sequence information.

Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303

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