qbatch changelog

Changelog History

• v2.2.1 Changes

  May 24, 2020

  • 🛠 fix python2 unicode support
  • ✂ remove unneeded dependencies

• v2.2 Changes

  March 12, 2020

  • 🛠 Fix log file naming for Slurm non-array jobs
  • ➕ Add CITATION.cff file
  • ⚡️ Update setup.py to fix description on PyPi
  • Chunk size can now be unlimited, set size "0" to have unlimited chunk
  • 🛠 Fix workdir vs chdir for old vs new Slurm by using the short "-D" option instead
  • 👷 Implement container mode for generating jobs to be parsed by external qbatch generated by internal qbatch within a container.

• v2.1.5 Changes

  July 05, 2019

  🛠 Bugfixes

  • 🛠 fix SLURM job search returning wrong result when no jobs
  • 🛠 fix UNICODE support in python2 for environment variables

• v2.1.4 Changes

  June 20, 2019

  🛠 Bugfixes:

  • Accidental embedding of quotes into squeue listing broke SLURM dependencies

• v2.1.3 Changes

  June 07, 2019

  🚀 A few bugs fixed after some testing of a new deployment c/o @egarza

  • 👷 always check for parallel before submitting jobs
  • 0️⃣ explicitly embed the shell as part of the job commands os that posix_compliant job starting on Torque/PBS/SGE will use the right shell, in cases where the default shell is /bin/csh

• v2.1.2 Changes

  June 07, 2019

  🛠 Fix dependency specification on SLURM

• v2.1.1 Changes

  May 23, 2019

  🛠 Fix single job submission

• v2.1 Changes

  February 25, 2019

  • ➕ Added proper setup.py for dependencies
  • Threads per command in local run
  • 🛠 Fix slurm logfile naming based on single or array jobs
  • 🚚 Move binary checks to presubmission so help works
  • 🛠 UTF-8 and python3 encoding fixes

• v2.0.2 Changes

  April 28, 2018

  PyPi packaging changed and doesn't automatically include VERSION anymore.

  Just code the version into setup.py instead of writing a full MANIFEST.in file