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Commit 4d1352a

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STY: Codespell
1 parent 9f17357 commit 4d1352a

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5 files changed

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‎.codespellrc‎

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@@ -10,4 +10,4 @@ skip = .git,*.pdf,*.svg,external
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# ALS, FWE - neuroimaging specific abbrevs
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# Comision - foreign word used
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# expad - AFNI flag
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ignore-words-list = te,inport,objekt,jist,nd,hel,inout,fith,whos,fot,ue,shs,smal,nam,filetest,suh,noo,reson,als,fwe,crasher,comision,afile,expad
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ignore-words-list = te,inport,objekt,jist,nd,hel,inout,fith,whos,fot,ue,shs,smal,nam,filetest,suh,noo,reson,als,fwe,crasher,comision,afile,expad,burnin

‎nipype/interfaces/freesurfer/utils.py‎

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@@ -2821,7 +2821,7 @@ def _format_arg(self, name, spec, value):
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if name in ["in_T1", "in_aseg"]:
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# These inputs do not take full paths as inputs or even basenames
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basename = os.path.basename(value)
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# whent the -mgz flag is specified, it assumes the mgz extension
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# when the -mgz flag is specified, it assumes the mgz extension
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if self.inputs.mgz:
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prefix = os.path.splitext(basename)[0]
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else:

‎nipype/pipeline/plugins/base.py‎

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Original file line numberDiff line numberDiff line change
@@ -628,7 +628,7 @@ def _get_args(self, node, keywords):
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def _submit_graph(self, pyfiles, dependencies, nodes):
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"""
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pyfiles: list of files corresponding to a topological sort
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dependencies: dictionary of dependencies based on the toplogical sort
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dependencies: dictionary of dependencies based on the topological sort
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"""
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raise NotImplementedError
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‎nipype/utils/docparse.py‎

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Original file line numberDiff line numberDiff line change
@@ -131,7 +131,7 @@ def insert_doc(doc, new_items):
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Parameters
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----------
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doc : str
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The existing docstring we're inserting docmentation into.
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The existing docstring we're inserting documentation into.
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new_items : list
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List of strings to be inserted in the ``doc``.
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‎nipype/utils/matlabtools.py‎

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@@ -56,7 +56,7 @@ def mlab_tempfile(dir=None):
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# infinite loop for some strange reason, we only try 100 times.
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for n in range(100):
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f = tempfile.NamedTemporaryFile(suffix=".m", prefix="tmp_matlab_", dir=dir)
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# Check the file name for matlab compilance
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# Check the file name for matlab compliance
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fname = os.path.splitext(os.path.basename(f.name))[0]
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if valid_name.match(fname):
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break

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