SNPannotator: Automated Functional Annotation of Genetic Variants and Linked
Proxies
To automated functional annotation of genetic variants and linked proxies. Linked SNPs in moderate to high linkage disequilibrium (e.g. r2>0.50) with the corresponding index SNPs will be selected for further analysis.
Version:
1.4.3
Depends:
R (≥ 4.0)
Imports:
data.table (≥ 1.15.4),
httr (≥ 1.4.7),
jsonlite (≥ 1.8.8),
xml2 (≥ 1.3.6),
openxlsx (≥ 4.2.5.2),
progress (≥ 1.2.3),
ggplot2 (≥ 3.5.1),
kableExtra (≥ 1.4.0), methods (≥ 4.2.0),
rmarkdown (≥ 2.26),
ini (≥ 0.3.1),
igraph (≥ 2.0.3),
ggraph (≥ 2.2.1),
futile.logger (≥ 1.4.3),
png ,
readr (≥ 2.1.5)
Published:
2025年11月26日
Author:
Alireza Ani [aut, cre],
Zoha Kamali [aut],
Ahmad Vaez [aut]
Maintainer:
Alireza Ani <a.ani at umcg.nl>
NeedsCompilation:
no
Documentation:
Downloads:
Linking:
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