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Okay, I have attached the code I've been using. Don't worry about what it does (it's a biology thing), but just follow these steps:
1. Make sure you have numpy and scipy installed.
2. Extract the zip file.
3. Run it with ./svm_main.py test_obligate.dat test_transient.dat
The method svm_main.grid_search and the module grid_search_process are probably the only things you need pay attention to, everything else is problem-specific.