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synaptome.db
This is the released version of synaptome.db; for the devel version, see synaptome.db.
Synamptosome Proteome Database
Bioconductor version: Release (3.22)
The package contains local copy of the Synaptic proteome database. On top of this it provide a set of utility R functions to query and analyse its content. It allows extraction of information for specific genes and building the protein-protein interaction graph for gene sets, synaptic compartments, and brain regions.
Author: Anatoly Sorokin [aut], Oksana Sorokina [aut, cre], J. Douglas Armstrong [aut]
Maintainer: Oksana Sorokina <oksana.sorokina at ed.ac.uk>
citation("synaptome.db")):
Installation
To install this package, start R (version "4.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("synaptome.db")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("synaptome.db")
Details
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Package Archives
Follow Installation instructions to use this package in your R session.