diggitdata

This is the released version of diggitdata; for the devel version, see diggitdata.

Example data for the diggit package

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DOI: 10.18129/B9.bioc.diggitdata

Bioconductor version: Release (3.22)

This package provides expression profile and CNV data for glioblastoma from TCGA, and transcriptional and post-translational regulatory networks assembled with the ARACNe and MINDy algorithms, respectively.

Author: Mariano Javier Alvarez

Maintainer: Mariano Javier Alvarez <reef103 at gmail.com>

Citation (from within R, enter citation("diggitdata")):

Installation

To install this package, start R (version "4.5") and enter:


if (!require("BiocManager", quietly = TRUE))
 install.packages("BiocManager")
BiocManager::install("diggitdata")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("diggitdata")

Using bcellViper PDF R Script

Reference Manual PDF

NEWS Text

Need some help? Ask on the Bioconductor Support site!

Details

biocViews Cancer, ExperimentData

Version 1.42.0

License GPL (>=2)

Depends R (>= 2.14.0), Biobase, methods

Imports viper

System Requirements

URL

Suggests

Linking To

Enhances

Depends On Me

Imports Me

Suggests Me diggit

Links To Me

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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package diggitdata_1.42.0.tar.gz

Windows Binary (x86_64)

macOS Binary (x86_64)

macOS Binary (arm64)

Source Repository git clone https://git.bioconductor.org/packages/diggitdata

Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/diggitdata

Package Short Url https://bioconductor.org/packages/diggitdata/

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