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transformGamPoi
This is the released version of transformGamPoi; for the devel version, see transformGamPoi.
Variance Stabilizing Transformation for Gamma-Poisson Models
Bioconductor version: Release (3.22)
Variance-stabilizing transformations help with the analysis of heteroskedastic data (i.e., data where the variance is not constant, like count data). This package provide two types of variance stabilizing transformations: (1) methods based on the delta method (e.g., 'acosh', 'log(x+1)'), (2) model residual based (Pearson and randomized quantile residuals).
Author: Constantin Ahlmann-Eltze [aut, cre] ORCID iD ORCID: 0000-0002-3762-068X
Maintainer: Constantin Ahlmann-Eltze <artjom31415 at googlemail.com>
citation("transformGamPoi")):
Installation
To install this package, start R (version "4.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("transformGamPoi")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("transformGamPoi")
Details
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Package Archives
Follow Installation instructions to use this package in your R session.