rqubic

This is the released version of rqubic; for the devel version, see rqubic.

Qualitative biclustering algorithm for expression data analysis in R

Bioconductor version: Release (3.22)

This package implements the QUBIC algorithm introduced by Li et al. for the qualitative biclustering with gene expression data.

Author: Jitao David Zhang [aut, cre, ctb] ORCID iD ORCID: 0000-0002-3085-0909

Maintainer: Jitao David Zhang <jitao_david.zhang at roche.com>

Citation (from within R, enter citation("rqubic")):

To install this package, start R (version "4.5") and enter:


if (!require("BiocManager", quietly = TRUE))
 install.packages("BiocManager")
BiocManager::install("rqubic")

For older versions of R, please refer to the appropriate Bioconductor release.

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("rqubic")

Qualitative Biclustering with Bioconductor Package rqubic PDF R Script

Reference Manual PDF

NEWS Text

biocViews Clustering, Software

Version 1.56.0

In Bioconductor since BioC 2.9 (R-2.14) (14 years)

License GPL-2

Depends

Imports methods, Biobase, BiocGenerics, biclust

System Requirements

URL

Suggests RColorBrewer

Linking To

Enhances

Depends On Me

Imports Me miRSM

Suggests Me

Links To Me

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Follow Installation instructions to use this package in your R session.

Source Package rqubic_1.56.0.tar.gz

Windows Binary (x86_64) rqubic_1.56.0.zip

macOS Binary (x86_64) rqubic_1.56.0.tgz

macOS Binary (arm64) rqubic_1.56.0.tgz

Source Repository git clone https://git.bioconductor.org/packages/rqubic

Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/rqubic

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