lumi
This is the released version of lumi; for the devel version, see lumi.
BeadArray Specific Methods for Illumina Methylation and Expression Microarrays
Bioconductor version: Release (3.22)
The lumi package provides an integrated solution for the Illumina microarray data analysis. It includes functions of Illumina BeadStudio (GenomeStudio) data input, quality control, BeadArray-specific variance stabilization, normalization and gene annotation at the probe level. It also includes the functions of processing Illumina methylation microarrays, especially Illumina Infinium methylation microarrays.
Author: Pan Du, Richard Bourgon, Gang Feng, Simon Lin
Maintainer: Lei Huang <lhuang1998 at gmail.com>
citation("lumi")):
Installation
To install this package, start R (version "4.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("lumi")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
Details
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Package Archives
Follow Installation instructions to use this package in your R session.