SurfR
This is the released version of SurfR; for the devel version, see SurfR.
Surface Protein Prediction and Identification
Bioconductor version: Release (3.22)
Identify Surface Protein coding genes from a list of candidates. Systematically download data from GEO and TCGA or use your own data. Perform DGE on bulk RNAseq data. Perform Meta-analysis. Descriptive enrichment analysis and plots.
Author: Aurora Maurizio [aut, cre] ORCID iD ORCID: 0000-0002-7194-4637 , Anna Sofia Tascini [aut, ctb] ORCID iD ORCID: 0000-0001-5731-5490
Maintainer: Aurora Maurizio <auroramaurizio1 at gmail.com>
citation("SurfR")):
Installation
To install this package, start R (version "4.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("SurfR")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("SurfR")
Details
See More
Package Archives
Follow Installation instructions to use this package in your R session.