CelliD
This is the released version of CelliD; for the devel version, see CelliD.
Unbiased Extraction of Single Cell gene signatures using Multiple Correspondence Analysis
Bioconductor version: Release (3.22)
CelliD is a clustering-free multivariate statistical method for the robust extraction of per-cell gene signatures from single-cell RNA-seq. CelliD allows unbiased cell identity recognition across different donors, tissues-of-origin, model organisms and single-cell omics protocols. The package can also be used to explore functional pathways enrichment in single cell data.
Author: Akira Cortal [aut, cre], Antonio Rausell [aut, ctb]
Maintainer: Akira Cortal <akira.cortal at institutimagine.org>
citation("CelliD")):
Installation
To install this package, start R (version "4.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("CelliD")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("CelliD")
Details
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Follow Installation instructions to use this package in your R session.