muSpaData

This is the development version of muSpaData; for the stable release version, see muSpaData.

Multi-sample multi-group spatially resolved transcriptomic data

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DOI: 10.18129/B9.bioc.muSpaData

Bioconductor version: Development (3.23)

Data package containing a multi-sample multi-group spatial dataset in SpatialExperiment Bioconductor object format.

Author: Peiying Cai [aut, cre] ORCID iD ORCID: 0009-0001-9229-2244

Maintainer: Peiying Cai <peiying.cai at uzh.ch>

Citation (from within R, enter citation("muSpaData")):

Installation

To install this package, start R (version "4.6") and enter:


if (!require("BiocManager", quietly = TRUE))
 install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("muSpaData")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("muSpaData")

Multi-sample multi-group spatial transcriptomics data HTML R Script

Reference Manual PDF

NEWS Text

LICENSE Text

Need some help? Ask on the Bioconductor Support site!

Details

biocViews ExperimentData, ExperimentHub, ExpressionData, SingleCellData, SpatialData

Version 1.3.0

License MIT + file LICENSE

Depends R (>= 4.5.0), ExperimentHub

Imports

System Requirements

URL https://github.com/peicai/muSpaData

Bug Reports https://github.com/peicai/muSpaData/issues

Suggests SpatialExperiment, ggplot2, BiocStyle, knitr, rmarkdown, R.utils

Linking To

Enhances

Depends On Me

Imports Me

Suggests Me DESpace

Links To Me

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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package muSpaData_1.3.0.tar.gz

Windows Binary (x86_64)

macOS Binary (x86_64)

macOS Binary (arm64)

Source Repository git clone https://git.bioconductor.org/packages/muSpaData

Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/muSpaData

Package Short Url https://bioconductor.org/packages/muSpaData/

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