curatedAdipoChIP

This is the development version of curatedAdipoChIP; for the stable release version, see curatedAdipoChIP.

A Curated ChIP-Seq Dataset of MDI-induced Differentiated Adipocytes (3T3-L1)

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DOI: 10.18129/B9.bioc.curatedAdipoChIP

Bioconductor version: Development (3.23)

A curated dataset of publicly available ChIP-sequencing of transcription factors, chromatin remodelers and histone modifications in the 3T3-L1 pre-adipocyte cell line. The package document the data collection, pre-processing and processing of the data. In addition to the documentation, the package contains the scripts that was used to generated the data.

Author: Mahmoud Ahmed [aut, cre] ORCID iD ORCID: 0000-0002-4377-6541

Maintainer: Mahmoud Ahmed <mahmoud.s.fahmy at students.kasralainy.edu.eg>

Citation (from within R, enter citation("curatedAdipoChIP")):

Installation

To install this package, start R (version "4.6") and enter:


if (!require("BiocManager", quietly = TRUE))
 install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("curatedAdipoChIP")

For older versions of R, please refer to the appropriate Bioconductor release.