SpatialDatasets

This is the development version of SpatialDatasets; for the stable release version, see SpatialDatasets.

Collection of spatial omics datasets

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DOI: 10.18129/B9.bioc.SpatialDatasets

Bioconductor version: Development (3.23)

This is a collection of publically available spatial omics datasets. Where possible we have curated these datasets as either SpatialExperiments, MoleculeExperiments or CytoImageLists and included annotations of the sample characteristics.

Author: Farhan Ameen [aut], Nick Robertson [aut], Alex Qin [aut], Shreya Rao [aut], Elijah Willie [aut], Ellis Patrick [aut, cre]

Maintainer: Ellis Patrick <ellis.patrick at sydney.edu.au>

Citation (from within R, enter citation("SpatialDatasets")):

Installation

To install this package, start R (version "4.6") and enter:


if (!require("BiocManager", quietly = TRUE))
 install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("SpatialDatasets")

For older versions of R, please refer to the appropriate Bioconductor release.