MafH5.gnomAD.v4.0.GRCh38

This is the development version of MafH5.gnomAD.v4.0.GRCh38; for the stable release version, see MafH5.gnomAD.v4.0.GRCh38.

Minor allele frequency data from gnomAD version 4.0 for GRCh38

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DOI: 10.18129/B9.bioc.MafH5.gnomAD.v4.0.GRCh38

Bioconductor version: Development (3.23)

Store minor allele frequency data from the Genome Aggregation Database (gnomAD version 4.0) for the human genome version GRCh38.

Author: Robert Castelo

Maintainer: Robert Castelo <robert.castelo at upf.edu>

Citation (from within R, enter citation("MafH5.gnomAD.v4.0.GRCh38")):

Installation

To install this package, start R (version "4.6") and enter:


if (!require("BiocManager", quietly = TRUE))
 install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("MafH5.gnomAD.v4.0.GRCh38")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

Reference Manual PDF

NEWS Text

Need some help? Ask on the Bioconductor Support site!

Details

biocViews AnnotationData, Genetics, GenomicScores, Homo_sapiens

Version 3.19.0

License Artistic-2.0

Depends R (>= 4.0.0), GenomicScores(>= 2.7.2)

Imports utils, S4Vectors, IRanges, GenomicRanges, GenomeInfoDb, BSgenome, rhdf5, HDF5Array

System Requirements

URL

Suggests SNPlocs.Hsapiens.dbSNP149.GRCh38

Linking To

Enhances

Depends On Me

Imports Me

Suggests Me GenomicScores

Links To Me

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package MafH5.gnomAD.v4.0.GRCh38_3.19.0.tar.gz

Windows Binary (x86_64)

macOS Binary (x86_64)

macOS Binary (arm64)

Package Short Url https://bioconductor.org/packages/MafH5.gnomAD.v4.0.GRCh38/

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