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vmrseq
This is the development version of vmrseq; for the stable release version, see vmrseq.
Probabilistic Modeling of Single-cell Methylation Heterogeneity
Bioconductor version: Development (3.23)
High-throughput single-cell measurements of DNA methylation allows studying inter-cellular epigenetic heterogeneity, but this task faces the challenges of sparsity and noise. We present vmrseq, a statistical method that overcomes these challenges and identifies variably methylated regions accurately and robustly.
Author: Ning Shen [aut, cre]
Maintainer: Ning Shen <ning.shen.wk at gmail.com>
citation("vmrseq")):
Installation
To install this package, start R (version "4.6") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("vmrseq")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("vmrseq")
Details
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Follow Installation instructions to use this package in your R session.