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scClassify
This is the development version of scClassify; for the stable release version, see scClassify.
scClassify: single-cell Hierarchical Classification
Bioconductor version: Development (3.23)
scClassify is a multiscale classification framework for single-cell RNA-seq data based on ensemble learning and cell type hierarchies, enabling sample size estimation required for accurate cell type classification and joint classification of cells using multiple references.
Author: Yingxin Lin
Maintainer: Yingxin Lin <yingxin.lin at sydney.edu.au>
citation("scClassify")):
Installation
To install this package, start R (version "4.6") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("scClassify")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("scClassify")
Details
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Follow Installation instructions to use this package in your R session.