sampleClassifier

This is the development version of sampleClassifier; for the stable release version, see sampleClassifier.

Sample Classifier

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DOI: 10.18129/B9.bioc.sampleClassifier

Bioconductor version: Development (3.23)

The package is designed to classify microarray RNA-seq gene expression profiles.

Author: Khadija El Amrani [aut, cre]

Maintainer: Khadija El Amrani <a.khadija at gmx.de>

Citation (from within R, enter citation("sampleClassifier")):

Installation

To install this package, start R (version "4.6") and enter:


if (!require("BiocManager", quietly = TRUE))
 install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("sampleClassifier")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

Reference Manual PDF

Need some help? Ask on the Bioconductor Support site!

Details

biocViews Classification, GeneExpression, ImmunoOncology, Microarray, RNASeq, Software

Version 1.35.0

In Bioconductor since BioC 3.5 (R-3.4) (8.5 years)

License Artistic-2.0

Depends R (>= 4.0), MGFM, MGFR, annotate

Imports e1071, ggplot2, stats, utils

System Requirements

URL

Suggests sampleClassifierData, BiocStyle, hgu133a.db, hgu133plus2.db

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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package

Windows Binary (x86_64)

macOS Binary (x86_64)

macOS Binary (arm64)

Source Repository git clone https://git.bioconductor.org/packages/sampleClassifier

Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/sampleClassifier

Package Short Url https://bioconductor.org/packages/sampleClassifier/

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