coseq

This is the development version of coseq; for the stable release version, see coseq.

Co-Expression Analysis of Sequencing Data

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DOI: 10.18129/B9.bioc.coseq

Bioconductor version: Development (3.23)

Co-expression analysis for expression profiles arising from high-throughput sequencing data. Feature (e.g., gene) profiles are clustered using adapted transformations and mixture models or a K-means algorithm, and model selection criteria (to choose an appropriate number of clusters) are provided.

Author: Andrea Rau [cre, aut] ORCID iD ORCID: 0000-0001-6469-488X , Cathy Maugis-Rabusseau [ctb], Antoine Godichon-Baggioni [ctb]

Maintainer: Andrea Rau <andrea.rau at inrae.fr>

Citation (from within R, enter citation("coseq")):

Installation

To install this package, start R (version "4.6") and enter:


if (!require("BiocManager", quietly = TRUE))
 install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("coseq")

For older versions of R, please refer to the appropriate Bioconductor release.