cellbaseR

This is the development version of cellbaseR; for the stable release version, see cellbaseR.

Querying annotation data from the high performance Cellbase web

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DOI: 10.18129/B9.bioc.cellbaseR

Bioconductor version: Development (3.23)

This R package makes use of the exhaustive RESTful Web service API that has been implemented for the Cellabase database. It enable researchers to query and obtain a wealth of biological information from a single database saving a lot of time. Another benefit is that researchers can easily make queries about different biological topics and link all this information together as all information is integrated.

Author: Mohammed OE Abdallah

Maintainer: Mohammed OE Abdallah <melsiddieg at gmail.com>

Citation (from within R, enter citation("cellbaseR")):

Installation

To install this package, start R (version "4.6") and enter:


if (!require("BiocManager", quietly = TRUE))
 install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("cellbaseR")

For older versions of R, please refer to the appropriate Bioconductor release.