basilisk.utils

This is the development version of basilisk.utils; for the stable release version, see basilisk.utils.

Centralized Conda Installation for Bioconductor Packages

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DOI: 10.18129/B9.bioc.basilisk.utils

Bioconductor version: Development (3.23)

Provides a centralized conda installation for use by other Bioconductor packages. If conda is not already available on the system, it is downloaded and installed from the Miniforge project; otherwise, no action is performed. Historically, this package was used to provide a Python installation for basilisk, hence the name.

Author: Aaron Lun [aut, cre, cph]

Maintainer: Aaron Lun <infinite.monkeys.with.keyboards at gmail.com>

Citation (from within R, enter citation("basilisk.utils")):

Installation

To install this package, start R (version "4.6") and enter:


if (!require("BiocManager", quietly = TRUE))
 install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("basilisk.utils")

For older versions of R, please refer to the appropriate Bioconductor release.