SynExtend

This is the development version of SynExtend; for the stable release version, see SynExtend.

Tools for Comparative Genomics

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DOI: 10.18129/B9.bioc.SynExtend

Bioconductor version: Development (3.23)

A multitude of tools for comparative genomics, focused on large-scale analyses of biological data. SynExtend includes tools for working with syntenic data, clustering massive network structures, and estimating functional relationships among genes.

Author: Nicholas Cooley [aut, cre] ORCID iD ORCID: 0000-0002-6029-304X , Aidan Lakshman [aut, ctb] ORCID iD ORCID: 0000-0002-9465-6785 , Adelle Fernando [ctb], Erik Wright [aut]

Maintainer: Nicholas Cooley <npc19 at pitt.edu>

Citation (from within R, enter citation("SynExtend")):

Installation

To install this package, start R (version "4.6") and enter:


if (!require("BiocManager", quietly = TRUE))
 install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("SynExtend")

For older versions of R, please refer to the appropriate Bioconductor release.