SanityR

This is the development version of SanityR; for the stable release version, see SanityR.

R/Bioconductor interface to the Sanity model gene expression analysis

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DOI: 10.18129/B9.bioc.SanityR

Bioconductor version: Development (3.23)

a Bayesian normalization procedure derived from first principles. Sanity estimates expression values and associated error bars directly from raw unique molecular identifier (UMI) counts without any tunable parameters.

Author: Teo Sakel [aut, cre] ORCID iD ORCID: 0000-0001-9946-9498 , MCIU/AEI [fnd] (ROR: <https://ror.org/05r0vyz12>, DOI: 10.13039/501100011033)

Maintainer: Teo Sakel <teo at intelligentbiodata.com>

Citation (from within R, enter citation("SanityR")):

Installation

To install this package, start R (version "4.6") and enter:


if (!require("BiocManager", quietly = TRUE))
 install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("SanityR")

For older versions of R, please refer to the appropriate Bioconductor release.