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Path2PPI
This is the development version of Path2PPI; for the stable release version, see Path2PPI.
Prediction of pathway-related protein-protein interaction networks
Bioconductor version: Development (3.23)
Package to predict protein-protein interaction (PPI) networks in target organisms for which only a view information about PPIs is available. Path2PPI predicts PPI networks based on sets of proteins which can belong to a certain pathway from well-established model organisms. It helps to combine and transfer information of a certain pathway or biological process from several reference organisms to one target organism. Path2PPI only depends on the sequence similarity of the involved proteins.
Author: Oliver Philipp [aut, cre], Ina Koch [ctb]
Maintainer: Oliver Philipp <contact at oliverphilipp.info>
citation("Path2PPI")):
Installation
To install this package, start R (version "4.6") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("Path2PPI")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("Path2PPI")
Details
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Package Archives
Follow Installation instructions to use this package in your R session.