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NanoTube
This is the development version of NanoTube; for the stable release version, see NanoTube.
An Easy Pipeline for NanoString nCounter Data Analysis
Bioconductor version: Development (3.23)
NanoTube includes functions for the processing, quality control, analysis, and visualization of NanoString nCounter data. Analysis functions include differential analysis and gene set analysis methods, as well as postprocessing steps to help understand the results. Additional functions are included to enable interoperability with other Bioconductor NanoString data analysis packages.
Author: Caleb Class [cre, aut] ORCID iD ORCID: 0000-0003-3130-3613 , Caiden Lukan [ctb]
Maintainer: Caleb Class <cclass at butler.edu>
citation("NanoTube")):
Installation
To install this package, start R (version "4.6") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("NanoTube")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("NanoTube")
Details
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Package Archives
Follow Installation instructions to use this package in your R session.