Doscheda

This is the development version of Doscheda; for the stable release version, see Doscheda.

A DownStream Chemo-Proteomics Analysis Pipeline

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DOI: 10.18129/B9.bioc.Doscheda

Bioconductor version: Development (3.23)

Doscheda focuses on quantitative chemoproteomics used to determine protein interaction profiles of small molecules from whole cell or tissue lysates using Mass Spectrometry data. The package provides a shiny application to run the pipeline, several visualisations and a downloadable report of an experiment.

Author: Bruno Contrino, Piero Ricchiuto

Maintainer: Bruno Contrino <br1contrino at yahoo.co.uk>

Citation (from within R, enter citation("Doscheda")):

Installation

To install this package, start R (version "4.6") and enter:


if (!require("BiocManager", quietly = TRUE))
 install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("Doscheda")

For older versions of R, please refer to the appropriate Bioconductor release.