CSSQ

This is the development version of CSSQ; for the stable release version, see CSSQ.

Chip-seq Signal Quantifier Pipeline

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DOI: 10.18129/B9.bioc.CSSQ

Bioconductor version: Development (3.23)

This package is desgined to perform statistical analysis to identify statistically significant differentially bound regions between multiple groups of ChIP-seq dataset.

Author: Ashwath Kumar [aut], Michael Y Hu [aut], Yajun Mei [aut], Yuhong Fan [aut]

Maintainer: Fan Lab at Georgia Institute of Technology <yuhong.fan at biology.gatech.edu>

Citation (from within R, enter citation("CSSQ")):

Installation

To install this package, start R (version "4.6") and enter:


if (!require("BiocManager", quietly = TRUE))
 install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("CSSQ")

For older versions of R, please refer to the appropriate Bioconductor release.