derfinderData

This is the released version of derfinderData; for the devel version, see derfinderData.

Processed BigWigs from BrainSpan for examples

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DOI: 10.18129/B9.bioc.derfinderData

Bioconductor version: Release (3.22)

Processed 22 samples from BrainSpan keeping only the information for chromosome 21. Data is stored in the BigWig format and is used for examples in other packages.

Author: Leonardo Collado-Torres [aut, cre] ORCID iD ORCID: 0000-0003-2140-308X , Andrew Jaffe [aut] ORCID iD ORCID: 0000-0001-6886-1454 , Jeffrey Leek [aut, ths] ORCID iD ORCID: 0000-0002-2873-2671

Maintainer: Leonardo Collado-Torres <lcolladotor at gmail.com>

Citation (from within R, enter citation("derfinderData")):

Installation

To install this package, start R (version "4.5") and enter:


if (!require("BiocManager", quietly = TRUE))
 install.packages("BiocManager")
BiocManager::install("derfinderData")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("derfinderData")

Introduction to derfinderData HTML R Script

Reference Manual PDF

NEWS Text

Need some help? Ask on the Bioconductor Support site!

Details

biocViews ExperimentData, Homo_sapiens_Data, RNASeqData

Version 2.28.0

License Artistic-2.0

Depends R (>= 3.5.0)

Imports

System Requirements

URL https://github.com/leekgroup/derfinderData

Bug Reports https://github.com/leekgroup/derfinderData/issues

Suggests sessioninfo, knitr (>= 1.6), RefManageR, rmarkdown (>= 0.3.3), BiocStyle

Linking To

Enhances

Depends On Me

Imports Me

Suggests Me derfinder, derfinderPlot

Links To Me

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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package derfinderData_2.28.0.tar.gz

Windows Binary (x86_64)

macOS Binary (x86_64)

macOS Binary (arm64)

Source Repository git clone https://git.bioconductor.org/packages/derfinderData

Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/derfinderData

Package Short Url https://bioconductor.org/packages/derfinderData/

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