antiProfilesData

This is the released version of antiProfilesData; for the devel version, see antiProfilesData.

Normal colon and cancer preprocessed affy data for antiProfile building.

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DOI: 10.18129/B9.bioc.antiProfilesData

Bioconductor version: Release (3.22)

Colon normal tissue and cancer samples used in Corrada Bravo, et al. gene expression anti-profiles paper: BMC Bioinformatics 2012, 13:272 doi:10.1186/1471-2105-13-272. Measurements are z-scores obtained from the GeneExpression Barcode in the 'frma' package

Author: Hector Corrada Bravo, Matthew McCall and Rafael A. Irizarry

Maintainer: Hector Corrada Bravo <hcorrada at gmail.com>

Citation (from within R, enter citation("antiProfilesData")):

Installation

To install this package, start R (version "4.5") and enter:


if (!require("BiocManager", quietly = TRUE))
 install.packages("BiocManager")
BiocManager::install("antiProfilesData")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

Reference Manual PDF

Need some help? Ask on the Bioconductor Support site!

Details

biocViews CancerData, ColonCancerData, ExperimentData, MicroarrayData, Tissue

Version 1.46.0

License Artistic-2.0

Depends Biobase

Imports

System Requirements

URL

Suggests frma, GEOquery, GEOmetadb

Linking To

Enhances

Depends On Me

Imports Me

Suggests Me antiProfiles, epivizr, epivizrChart, messina

Links To Me

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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package antiProfilesData_1.46.0.tar.gz

Windows Binary (x86_64)

macOS Binary (x86_64)

macOS Binary (arm64)

Source Repository git clone https://git.bioconductor.org/packages/antiProfilesData

Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/antiProfilesData

Package Short Url https://bioconductor.org/packages/antiProfilesData/

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