CNViz
This is the released version of CNViz; for the devel version, see CNViz.
Copy Number Visualization
Bioconductor version: Release (3.22)
CNViz takes probe, gene, and segment-level log2 copy number ratios and launches a Shiny app to visualize your sample's copy number profile. You can also integrate loss of heterozygosity (LOH) and single nucleotide variant (SNV) data.
Author: Rebecca Greenblatt [aut, cre]
Maintainer: Rebecca Greenblatt <rebecca.greenblatt at gmail.com>
citation("CNViz")):
Installation
To install this package, start R (version "4.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("CNViz")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("CNViz")
Details
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Package Archives
Follow Installation instructions to use this package in your R session.