maigesPack

This package is for version 3.9 of Bioconductor; for the stable, up-to-date release version, see maigesPack.

Functions to handle cDNA microarray data, including several methods of data analysis

Bioconductor version: 3.9

This package uses functions of various other packages together with other functions in a coordinated way to handle and analyse cDNA microarray data

Author: Gustavo H. Esteves <gesteves at gmail.com>, with contributions from Roberto Hirata Jr <hirata at ime.usp.br>, E. Jordao Neves <neves at ime.usp.br>, Elier B. Cristo <elier at ime.usp.br>, Ana C. Simoes <anakqui at ime.usp.br> and Lucas Fahham <fahham at linux.ime.usp.br>

Maintainer: Gustavo H. Esteves <gesteves at gmail.com>

Citation (from within R, enter citation("maigesPack")):

Installation

To install this package, start R (version "3.6") and enter:


if (!require("BiocManager", quietly = TRUE))
 install.packages("BiocManager")
BiocManager::install("maigesPack")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("maigesPack")

maigesPack Tutorial PDF R Script

Reference Manual PDF

Need some help? Ask on the Bioconductor Support site!

Details

biocViews Classification, Clustering, DifferentialExpression, GraphAndNetwork, Microarray, Preprocessing, Software, ThirdPartyClient, TwoChannel

Version 1.48.0

In Bioconductor since BioC 2.1 (R-2.6) (16.5 years)

License GPL (>= 2)

Depends R (>= 2.10), convert, graph, limma, marray, methods

Imports

System Requirements

URL http://www.maiges.org/en/software/

Suggests amap, annotate, class, e1071, MASS, multtest, OLIN, R2HTML, rgl, som

Linking To

Enhances

Depends On Me

Imports Me

Suggests Me

Links To Me

Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package maigesPack_1.48.0.tar.gz

Windows Binary maigesPack_1.48.0.zip

Mac OS X 10.11 (El Capitan) maigesPack_1.48.0.tgz

Source Repository git clone https://git.bioconductor.org/packages/maigesPack

Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/maigesPack

Bioc Package Browser https://code.bioconductor.org/browse/maigesPack/

Package Short Url https://bioconductor.org/packages/maigesPack/

Package Downloads Report Download Stats

Old Source Packages for BioC 3.9 Source Archive