iPAC

This package is for version 3.9 of Bioconductor; for the stable, up-to-date release version, see iPAC.

Identification of Protein Amino acid Clustering

Bioconductor version: 3.9

iPAC is a novel tool to identify somatic amino acid mutation clustering within proteins while taking into account protein structure.

Author: Gregory Ryslik, Hongyu Zhao

Maintainer: Gregory Ryslik <gregory.ryslik at yale.edu>

Citation (from within R, enter citation("iPAC")):

To install this package, start R (version "3.6") and enter:


if (!require("BiocManager", quietly = TRUE))
 install.packages("BiocManager")
BiocManager::install("iPAC")

For older versions of R, please refer to the appropriate Bioconductor release.

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("iPAC")

iPAC: identification of Protein Amino acid Mutations PDF R Script

Reference Manual PDF

NEWS Text

Version 1.28.0

In Bioconductor since BioC 2.11 (R-2.15) (11.5 years)

License GPL-2

Depends R (>= 2.15), gdata, scatterplot3d, Biostrings, multtest

Imports

System Requirements

URL

Suggests

Linking To

Enhances

Depends On Me GraphPAC, QuartPAC, SpacePAC

Imports Me

Suggests Me

Links To Me

Build Report Build Report

Follow Installation instructions to use this package in your R session.

Source Package iPAC_1.28.0.tar.gz

Windows Binary iPAC_1.28.0.zip

Mac OS X 10.11 (El Capitan) iPAC_1.28.0.tgz

Source Repository git clone https://git.bioconductor.org/packages/iPAC

Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/iPAC

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Old Source Packages for BioC 3.9 Source Archive