made4

This package is for version 3.8 of Bioconductor; for the stable, up-to-date release version, see made4.

Multivariate analysis of microarray data using ADE4

Bioconductor version: 3.8

Multivariate data analysis and graphical display of microarray data. Functions include between group analysis and coinertia analysis. It contains functions that require ADE4.

Author: Aedin Culhane

Maintainer: Aedin Culhane <Aedin at jimmy.harvard.edu>

Citation (from within R, enter citation("made4")):

Installation

To install this package, start R (version "3.5") and enter:


if (!require("BiocManager", quietly = TRUE))
 install.packages("BiocManager")
BiocManager::install("made4")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("made4")

introduction.pdf PDF R Script

Reference Manual PDF

Need some help? Ask on the Bioconductor Support site!

Details

biocViews Classification, Clustering, MultipleComparison, Software

Version 1.56.0

In Bioconductor since BioC 1.6 (R-2.1) or earlier (> 19 years)

License Artistic-2.0

Depends ade4, RColorBrewer, gplots, scatterplot3d

Imports

System Requirements

URL http://www.hsph.harvard.edu/aedin-culhane/

Suggests affy

Linking To

Enhances

Depends On Me bgafun

Imports Me omicade4

Suggests Me prot2D

Links To Me

Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package made4_1.56.0.tar.gz

Windows Binary made4_1.56.0.zip

Mac OS X 10.11 (El Capitan) made4_1.56.0.tgz

Source Repository git clone https://git.bioconductor.org/packages/made4

Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/made4

Bioc Package Browser https://code.bioconductor.org/browse/made4/

Package Short Url https://bioconductor.org/packages/made4/

Package Downloads Report Download Stats

Old Source Packages for BioC 3.8 Source Archive