scRNAseq

This package is for version 3.7 of Bioconductor; for the stable, up-to-date release version, see scRNAseq.

A Collection of Public Single-Cell RNA-Seq Datasets

Bioconductor version: 3.7

Gene-level read counts of three public scRNA-seq datasets. See vignette for details.

Author: Davide Risso [aut, cre, cph], Michael Cole [aut]

Maintainer: Davide Risso <risso.davide at gmail.com>

Citation (from within R, enter citation("scRNAseq")):

To install this package, start R (version "3.5") and enter:


if (!require("BiocManager", quietly = TRUE))
 install.packages("BiocManager")
BiocManager::install("scRNAseq")

For older versions of R, please refer to the appropriate Bioconductor release.

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("scRNAseq")

scRNAseq HTML R Script

Reference Manual PDF

Version 1.6.0

License CC0

Depends R (>= 3.3), SummarizedExperiment

Imports

System Requirements

URL

Suggests BiocStyle, knitr, rmarkdown

Linking To

Enhances

Depends On Me simpleSingleCell

Imports Me

Links To Me

Build Report Build Report

Follow Installation instructions to use this package in your R session.

Source Package scRNAseq_1.6.0.tar.gz

Windows Binary

Mac OS X 10.11 (El Capitan)

Source Repository git clone https://git.bioconductor.org/packages/scRNAseq

Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/scRNAseq

Package Downloads Report Download Stats