RnaSeqTutorial

This package is for version 3.7 of Bioconductor. This package has been removed from Bioconductor. For the last stable, up-to-date release version, see RnaSeqTutorial.

RNA-Seq Tutorial (EBI Cambridge UK, October 2011)

DOI: 10.18129/B9.bioc.RnaSeqTutorial

Bioconductor version: 3.7

A selection of RNA-Seq data to get familiar with the related Bioconductor core packages and the easyRNASeq package.

Author: Nicolas Delhomme, Ismael Padioleau

Maintainer: Nicolas Delhomme <nicolas.delhomme at umu.se>

Citation (from within R, enter citation("RnaSeqTutorial")):

Installation

To install this package, start R (version "3.5") and enter:


if (!require("BiocManager", quietly = TRUE))
 install.packages("BiocManager")
BiocManager::install("RnaSeqTutorial")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("RnaSeqTutorial")

RNA-Seq Tutorial PDF R Script

Reference Manual PDF

NEWS Text

Need some help? Ask on the Bioconductor Support site!

Details

biocViews Drosophila_melanogaster_Data, ExperimentData, RNASeqData

Version 0.17.0

License Artistic-2.0

Depends R (>= 3.0.2), methods, easyRNASeq

Imports

System Requirements

URL

Suggests Rsamtools, ShortRead, BSgenome.Dmelanogaster.UCSC.dm3, GenomicAlignments, biomaRt, genomeIntervals

Linking To

Enhances

Depends On Me

Imports Me

Suggests Me

Links To Me

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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package RnaSeqTutorial_0.17.0.tar.gz

Windows Binary

Mac OS X 10.11 (El Capitan)

Source Repository git clone https://git.bioconductor.org/packages/RnaSeqTutorial

Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/RnaSeqTutorial

Package Short Url https://bioconductor.org/packages/RnaSeqTutorial/

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