statTarget

This package is for version 3.7 of Bioconductor; for the stable, up-to-date release version, see statTarget.

Statistical Analysis of Metabolite Profile

Bioconductor version: 3.7

An easy to use tool provides a graphical user interface for quality control based shift signal correction, integration of metabolomic data from multi-batch experiments, and the comprehensive statistic analysis in non-targeted or targeted metabolomics.

Author: Hemi Luan

Maintainer: Hemi Luan <hemi.luan at gmail.com>

Citation (from within R, enter citation("statTarget")):

Installation

To install this package, start R (version "3.5") and enter:


if (!require("BiocManager", quietly = TRUE))
 install.packages("BiocManager")
BiocManager::install("statTarget")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("statTarget")

statTargetIntroduction HTML R Script

Reference Manual PDF

NEWS Text

Need some help? Ask on the Bioconductor Support site!

Details

biocViews GUI, MassSpectrometry, Metabolomics, QualityControl, Regression, Software

Version 1.10.0

In Bioconductor since BioC 3.4 (R-3.3) (7.5 years)

License GPL (>= 2)

Depends R (>= 3.3.0)

Imports randomForest, plyr, pdist, ROC, utils, grDevices, graphics, rrcov, stats, pls, impute, gWidgets2, gWidgets2RGtk2

System Requirements

URL https://github.com/13479776/statTarget

Suggests testthat, BiocStyle, knitr, rmarkdown

Linking To

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Depends On Me

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Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package statTarget_1.10.0.tar.gz

Windows Binary statTarget_1.10.0.zip

Mac OS X 10.11 (El Capitan) statTarget_1.10.0.tgz

Source Repository git clone https://git.bioconductor.org/packages/statTarget

Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/statTarget

Package Short Url https://bioconductor.org/packages/statTarget/

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Old Source Packages for BioC 3.7 Source Archive