fCI
This package is for version 3.7 of Bioconductor; for the stable, up-to-date release version, see fCI.
f-divergence Cutoff Index for Differential Expression Analysis in Transcriptomics and Proteomics
DOI: 10.18129/B9.bioc.fCI
Bioconductor version: 3.7
(f-divergence Cutoff Index), is to find DEGs in the transcriptomic & proteomic data, and identify DEGs by computing the difference between the distribution of fold-changes for the control-control and remaining (non-differential) case-control gene expression ratio data. fCI provides several advantages compared to existing methods.
Author: Shaojun Tang
Maintainer: Shaojun Tang <tangshao2008 at gmail.com>
citation("fCI")):
Installation
To install this package, start R (version "3.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("fCI")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("fCI")
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Follow Installation instructions to use this package in your R session.