derfinderHelper

This package is for version 3.7 of Bioconductor; for the stable, up-to-date release version, see derfinderHelper.

derfinder helper package

Bioconductor version: 3.7

Helper package for speeding up the derfinder package when using multiple cores.

Author: Leonardo Collado-Torres [aut, cre], Andrew E. Jaffe [aut], Jeffrey T. Leek [aut, ths]

Maintainer: Leonardo Collado-Torres <lcollado at jhu.edu>

Citation (from within R, enter citation("derfinderHelper")):

To install this package, start R (version "3.5") and enter:


if (!require("BiocManager", quietly = TRUE))
 install.packages("BiocManager")
BiocManager::install("derfinderHelper")

For older versions of R, please refer to the appropriate Bioconductor release.

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("derfinderHelper")

Introduction to derfinderHelper HTML R Script

Reference Manual PDF

NEWS Text

Version 1.14.0

In Bioconductor since BioC 3.0 (R-3.1) (9.5 years)

License Artistic-2.0

Depends R (>= 3.2.2)

Imports IRanges(>= 1.99.27), Matrix, methods, S4Vectors(>= 0.2.2)

System Requirements

Suggests devtools (>= 1.6), knitcitations (>= 1.0.1), knitr (>= 1.6), BiocStyle(>= 2.5.19), rmarkdown (>= 0.3.3), testthat

Linking To

Enhances

Depends On Me

Imports Me derfinder

Suggests Me

Links To Me

Build Report Build Report

Follow Installation instructions to use this package in your R session.

Windows Binary derfinderHelper_1.14.0.zip

Mac OS X 10.11 (El Capitan) derfinderHelper_1.14.0.tgz

Source Repository git clone https://git.bioconductor.org/packages/derfinderHelper

Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/derfinderHelper

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Old Source Packages for BioC 3.7 Source Archive