Rnits

This package is for version 3.7 of Bioconductor; for the stable, up-to-date release version, see Rnits.

R Normalization and Inference of Time Series data

Bioconductor version: 3.7

R/Bioconductor package for normalization, curve registration and inference in time course gene expression data

Author: Dipen P. Sangurdekar <dipen.sangurdekar at gmail.com>

Maintainer: Dipen P. Sangurdekar <dipen.sangurdekar at gmail.com>

Citation (from within R, enter citation("Rnits")):

To install this package, start R (version "3.5") and enter:


if (!require("BiocManager", quietly = TRUE))
 install.packages("BiocManager")
BiocManager::install("Rnits")

For older versions of R, please refer to the appropriate Bioconductor release.

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("Rnits")

R/Bioconductor package for normalization and differential expression inference in time series gene expression microarray data. PDF R Script

Reference Manual PDF

NEWS Text

Version 1.14.0

In Bioconductor since BioC 3.0 (R-3.1) (9.5 years)

License GPL-3

Depends R (>= 3.1.0), Biobase, ggplot2, limma, methods

Imports affy, boot, impute, splines, graphics, qvalue, reshape2

System Requirements

URL

Suggests BiocStyle, knitr, GEOquery, stringr

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Depends On Me

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Follow Installation instructions to use this package in your R session.

Source Package Rnits_1.14.0.tar.gz

Windows Binary Rnits_1.14.0.zip

Mac OS X 10.11 (El Capitan) Rnits_1.14.0.tgz

Source Repository git clone https://git.bioconductor.org/packages/Rnits

Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/Rnits

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Old Source Packages for BioC 3.7 Source Archive