PROPER

This package is for version 3.7 of Bioconductor; for the stable, up-to-date release version, see PROPER.

PROspective Power Evaluation for RNAseq

Bioconductor version: 3.7

This package provide simulation based methods for evaluating the statistical power in differential expression analysis from RNA-seq data.

Author: Hao Wu

Maintainer: Hao Wu <hao.wu at emory.edu>

Citation (from within R, enter citation("PROPER")):

To install this package, start R (version "3.5") and enter:


if (!require("BiocManager", quietly = TRUE))
 install.packages("BiocManager")
BiocManager::install("PROPER")

For older versions of R, please refer to the appropriate Bioconductor release.

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("PROPER")

Power and Sample size analysis for gene expression from RNA-seq PDF R Script

Reference Manual PDF

Version 1.12.0

In Bioconductor since BioC 3.1 (R-3.2) (9 years)

License GPL

Depends R (>= 2.10)

Imports edgeR

System Requirements

URL

Suggests BiocStyle, DESeq, DSS, knitr

Linking To

Enhances

Depends On Me

Imports Me

Suggests Me

Links To Me

Build Report Build Report

Follow Installation instructions to use this package in your R session.

Source Package PROPER_1.12.0.tar.gz

Windows Binary PROPER_1.12.0.zip

Mac OS X 10.11 (El Capitan) PROPER_1.12.0.tgz

Source Repository git clone https://git.bioconductor.org/packages/PROPER

Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/PROPER

Package Downloads Report Download Stats

Old Source Packages for BioC 3.7 Source Archive